sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHK-A320-A514
X
>3OHJ-A320-A514
X
>3R8N-A1256-A1254
X
>3R8S-A1832-A1920
X
>1IVS-D37-D35
X
>3KNI-A320-A514
X
>3R8T-A307-A500
X
>3U5D-3111-312
X
>3OHZ-A320-A514
X
>3F1F-A327-A521
X
</seq>
<hsp>
0 1:0.0438307942875
0 2:0.51310876684
0 3:0.511464650332
0 4:0.430051399755
0 5:0.266044301389
0 6:0.384050503085
0 7:0.72409859036
0 8:0.195791175718
0 9:0.271372565455
1 2:0.528658963887
1 3:0.521692608644
1 4:0.451331756691
1 5:0.26310662293
1 6:0.397344721735
1 7:0.73545009403
1 8:0.187823687164
1 9:0.283345586812
2 3:0.497449752492
2 4:0.459427187233
2 5:0.475657916006
2 6:0.684183881329
2 7:1.0
2 8:0.603406189814
2 9:0.537715070208
3 4:0.479200794968
3 5:0.585908218533
3 6:0.46247978555
3 7:0.798858331629
3 8:0.631191501626
3 9:0.544530092103
4 5:0.421264792681
4 6:0.496585952994
4 7:0.626426448791
4 8:0.584138965631
4 9:0.408576649599
5 6:0.498722365863
5 7:0.752411635648
5 8:0.359710602163
5 9:0.399465850072
6 7:0.501312692454
6 8:0.443268311651
6 9:0.421089678021
7 8:0.808508274602
7 9:0.702993670585
8 9:0.290283629587
</hsp>