sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-52443-52420
X
>3OHK-A2582-A1051
X
>3FOZ-D14-D54
X
>3OH5-A2582-A1051
X
>3FOZ-C17-C57
X
>3OH7-A2582-A1051
X
>1GTS-B15-B55
X
>3KNI-A53-A67
X
>2VQE-A1419-A1421
X
</seq>
<hsp>
0 1:0.611558005066
0 2:0.513494161746
0 3:0.84170847176
0 4:0.577836309809
0 5:0.839404138963
0 6:0.508104192945
0 7:0.776844072175
0 8:1.0
1 2:0.656230038734
1 3:0.276332289115
1 4:0.673040857378
1 5:0.274098326829
1 6:0.436187517591
1 7:0.574731165448
1 8:0.703923567242
2 3:0.739630486398
2 4:0.151120201791
2 5:0.738982364341
2 6:0.281578522049
2 7:0.398949167289
2 8:0.649542835543
3 4:0.736250187704
3 5:0.0165384744816
3 6:0.520107091722
3 7:0.528233172038
3 8:0.591327254592
4 5:0.734757339524
4 6:0.256373347748
4 7:0.362859071398
4 8:0.561335609784
5 6:0.5164031038
5 7:0.526425695925
5 8:0.589459931661
6 7:0.311352251869
6 8:0.517484083768
7 8:0.311460641721
</hsp>