sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCU-01835-01833
X
>1VQO-01835-01833
X
>3BNO-B16-B14
X
>3CD6-01835-01833
X
>3G71-01835-01833
X
>3KNK-B108-B14
X
>3R8T-A2817-A2818
X
>1K8A-A2681-A2682
X
>3R8O-A1502-A1500
X
</seq>
<hsp>
0 1:0.157311519824
0 2:0.488119689201
0 3:0.0958328257913
0 4:0.0669783735981
0 5:0.479577961258
0 6:0.694112347973
0 7:0.743475773525
0 8:0.932445545442
1 2:0.602862513607
1 3:0.221020984697
1 4:0.148439761691
1 5:0.57509654592
1 6:0.73156598245
1 7:0.730375487383
1 8:0.928978539193
2 3:0.468668150358
2 4:0.49371953883
2 5:0.371396717449
2 6:0.637686461964
2 7:0.814870461693
2 8:0.808075238483
3 4:0.092765471334
3 5:0.495554477153
3 6:0.628569325485
3 7:0.687268237085
3 8:0.917631471625
4 5:0.497420758101
4 6:0.650562702767
4 7:0.695796329333
4 8:0.910975555924
5 6:0.860353824297
5 7:0.999992138939
5 8:0.855055378537
6 7:0.282903738665
6 8:0.764351428468
7 8:0.775972809605
</hsp>