sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2IZM-S1-S12
X
>2BNY-S1-S12
X
>2C4Z-S1-S12
X
>3QRP-C3-B6
X
>1ZDH-S1-S12
X
>2C4Y-S1-S12
X
>3MOJ-A59-A10
X
>2OEU-B8-A12
X
</seq>
<hsp>
0 1:0.917930330021
0 2:0.803678463733
0 3:0.836166340835
0 4:0.903431507389
0 5:0.701103476155
0 6:0.788018913651
0 7:0.618218351352
1 2:0.373809271964
1 3:0.36383328103
1 4:0.697526836212
1 5:0.316219499864
1 6:0.999998424165
1 7:0.691659769575
2 3:0.525660036258
2 4:0.776698697593
2 5:0.276472477215
2 6:0.954203505621
2 7:0.688262040771
3 4:0.407609799315
3 5:0.289857388912
3 6:0.756760809539
3 7:0.470160606528
4 5:0.524181024609
4 6:0.494403179012
4 7:0.364986103921
5 6:0.747516811031
5 7:0.451965439519
6 7:0.343621288257
</hsp>