ClaRNA

Doublet Group info: classifier/stacking/<>/GG/sub-004

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/GG/sub-004
Members:
count: 39
download members
2VQF:A1004:A1008
3U5H:51902:51906
2O3W:A20:B2
2PN3:A21:B2
2BGG:P6:Q0
3OG8:C11:D3
2PN4:C21:D2
3S4P:A19:B2
3L25:C7:F1
3TMI:B10:C2
1YYO:E11:F1
1ZX7:A13:B1
3L25:C1:F7
1U1Y:R2:R15
2W89:A6:B1
2PN4:A21:B2
2O3Y:A20:B2
3F1E:A70:A83
3MEI:A21:B2
3JXR:A3:B3
2NPY:A12:B1
2D2L:A12:B1
2D2K:A12:B1
1ZFX:A12:B1
3JXQ:K1:L5
402D:A1:B7
2YKG:C8:D2
3GS1:A12:B1
3BBM:A12:B1
3CQS:B28:C2
2P7F:A12:B1
3GS8:C15:D2
2NPY:C15:D2
1ZFX:C15:D2
3BBI:A12:B1
3CR1:B28:C2
3I2S:B28:C2
3GS5:C15:C19
3I2U:B28:C2
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/SW_2BR 1 0.069
stacking/<> 49 0.082
stacking/>> 3 0.166
stacking/<< 9 0.168
base-ribose/W_4BR 2 0.265
base-phosphate/H_9BPh 14 0.268
base-ribose/S_1BR 3 0.274
base-phosphate/W_3BPh 31 0.279
base-ribose/W_6BR 3 0.318
base-ribose/W_5BR 7 0.324

Extra

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Reference image (generated by PyMOL):
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All members (generated by PyMOL):
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