sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3DIQ-A162-A164
X
>3DIR-A162-A164
X
>3DJ0-A162-A164
X
>3DIL-A162-A164
X
>3DIG-X162-X164
X
>3DIM-A162-A164
X
>3DIO-X162-X164
X
>3DIX-A162-A164
X
>3DJ2-A162-A164
X
>3D0X-A151-A153
X
>3DIZ-A162-A164
X
>3D0U-A151-A153
X
</seq>
<hsp>
0 1:0.480506625727
0 2:0.537280246111
0 3:0.537409650597
0 4:0.727589760257
0 5:0.785870546639
0 6:0.578178268531
0 7:0.44827400056
0 8:0.531949402896
0 9:1.0
0 10:0.713966950379
0 11:0.828337918035
1 2:0.314000007557
1 3:0.367252313829
1 4:0.680592170494
1 5:0.592779496417
1 6:0.388187757864
1 7:0.515368677236
1 8:0.402894404664
1 9:0.954177034251
1 10:0.760590263663
1 11:0.805963405038
2 3:0.141402538953
2 4:0.466003567459
2 5:0.350601879243
2 6:0.268454426463
2 7:0.411217224148
2 8:0.146005196758
2 9:0.714691614278
2 10:0.53581409111
2 11:0.606569522422
3 4:0.389429962641
3 5:0.364210304843
3 6:0.202637393618
3 7:0.369093202944
3 8:0.0975710042626
3 9:0.649888452399
3 10:0.472906811514
3 11:0.519609109126
4 5:0.408298709767
4 6:0.511512132781
4 7:0.448317638214
4 8:0.391487221281
4 9:0.408933311191
4 10:0.256728751346
4 11:0.316980503588
5 6:0.51593442395
5 7:0.539573849472
5 8:0.322683438648
5 9:0.579155154262
5 10:0.471987932153
5 11:0.524919416232
6 7:0.443746566996
6 8:0.25742379048
6 9:0.725393031072
6 10:0.564153622817
6 11:0.562356343274
7 8:0.366824166509
7 9:0.605854844724
7 10:0.398460956659
7 11:0.561870889903
8 9:0.649305507144
8 10:0.439822830319
8 11:0.499003451638
9 10:0.384555766983
9 11:0.487683282737
10 11:0.278586411908
</hsp>