sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1821-A1844
X
>3KNK-A1821-A1844
X
>3F1F-A1900-A1923
X
>3F1H-A1900-A1923
X
>3OI1-A1822-A1845
X
>3OHJ-A1822-A1845
X
>3OH7-A1822-A1845
X
>3OH5-A1822-A1845
X
>3OHK-A1822-A1845
X
>3R8T-A1898-A1921
X
>2J03-A1822-A1845
X
</seq>
<hsp>
0 1:0.929831780831
0 2:0.581284314137
0 3:0.562992774149
0 4:0.709137423064
0 5:0.791122622462
0 6:0.751844205884
0 7:0.722716104488
0 8:0.807686616161
0 9:1.0
0 10:0.955329877806
1 2:0.758198507888
1 3:0.760700462907
1 4:0.526462662809
1 5:0.565010828463
1 6:0.528657652732
1 7:0.508176115429
1 8:0.583172761086
1 9:0.936897041391
1 10:0.949938238535
2 3:0.0446626123477
2 4:0.424266507226
2 5:0.361868989881
2 6:0.443228331379
2 7:0.423964548082
2 8:0.358826624639
2 9:0.594643596798
2 10:0.531430089817
3 4:0.424780569076
3 5:0.365051358528
3 6:0.44446068313
3 7:0.42297233767
3 8:0.362119161555
3 9:0.60884585874
3 10:0.541005426315
4 5:0.203957602983
4 6:0.0903368893629
4 7:0.0880106463808
4 8:0.239671625739
4 9:0.501327567839
4 10:0.537443343073
5 6:0.187610319312
5 7:0.175425705252
5 8:0.0564153787068
5 9:0.491031446134
5 10:0.474402013245
6 7:0.0587897829687
6 8:0.21037097595
6 9:0.5085545522
6 10:0.502920759241
7 8:0.203277329509
7 9:0.535610463628
7 10:0.52188136853
8 9:0.495035336621
8 10:0.45123064097
9 10:0.349591601788
</hsp>