sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1T0E-A16-C1
X
>3F1E-A982-A994
X
>3F1G-A982-A994
X
>3NDB-M40-M44
X
>1LNG-B23-B27
X
>1G1X-D37-E18
X
>3R8T-A2132-A2144
X
>439D-A6-B2
X
>1KH6-A37-A39
X
</seq>
<hsp>
0 1:0.884272747474
0 2:0.887338937625
0 3:0.949336718254
0 4:0.999998466207
0 5:0.472708811255
0 6:0.917144988348
0 7:0.86743361998
0 8:0.688994451605
1 2:0.017515061056
1 3:0.430412238469
1 4:0.645111429865
1 5:0.657879425019
1 6:0.86292760765
1 7:0.622355746155
1 8:0.591258985564
2 3:0.441080848987
2 4:0.647332038757
2 5:0.664854508182
2 6:0.865954498129
2 7:0.625036325438
2 8:0.590589298623
3 4:0.589695540586
3 5:0.608710567061
3 6:0.793582451409
3 7:0.577932442036
3 8:0.618457800537
4 5:0.730609674812
4 6:0.371921285546
4 7:0.344432983777
4 8:0.455254121127
5 6:0.762894874477
5 7:0.544865498621
5 8:0.482216806772
6 7:0.488766593913
6 8:0.504017705688
7 8:0.268028905205
</hsp>