sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A2133-A2145
X
>3F1F-A2135-A2145
X
>3F1H-A2135-A2145
X
>3DW5-A1-A26
X
>3DVZ-A1-A26
X
>483D-A1-A26
X
>1Q9A-A1-A26
X
>3DW7-A1-A26
X
>480D-A1-A26
X
</seq>
<hsp>
0 1:0.770900112297
0 2:0.768865611232
0 3:0.971218937352
0 4:0.943644246387
0 5:0.999999128572
0 6:0.993335093418
0 7:0.949088292623
0 8:0.956957309626
1 2:0.00926663962717
1 3:0.356005097456
1 4:0.3284596575
1 5:0.323589706059
1 6:0.319870328538
1 7:0.291929095048
1 8:0.26554857452
2 3:0.351994773494
2 4:0.324317541439
2 5:0.320851717712
2 6:0.317067918817
2 7:0.28795646391
2 8:0.262586290632
3 4:0.0912778437051
3 5:0.0945753683874
3 6:0.0951791917263
3 7:0.0960990260872
3 8:0.162697910797
4 5:0.117495813976
4 6:0.113761069175
4 7:0.0970636138432
4 8:0.115327138221
5 6:0.0250676108459
5 7:0.0711081396164
5 8:0.110259290666
6 7:0.0625066920818
6 8:0.108884448302
7 8:0.0979936706507
</hsp>