sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-6895-6896
X
>3U5H-51192-51193
X
>2J03-A131-A132
X
>2J01-A131-A132
X
>3F1H-A131-A132
X
>3F1F-A131-A132
X
>3OI1-A131-A132
X
>3OHZ-A131-A132
X
</seq>
<hsp>
0 1:0.401217505555
0 2:0.991663367133
0 3:0.999997957266
0 4:0.830707096275
0 5:0.815242933801
0 6:0.840546692672
0 7:0.829157326963
1 2:0.924370047502
1 3:0.929902545226
1 4:0.72378970101
1 5:0.707111609862
1 6:0.758098793557
1 7:0.751919288369
2 3:0.0179368358299
2 4:0.319767866455
2 5:0.322964281766
2 6:0.286736671275
2 7:0.292519034571
3 4:0.317239062893
3 5:0.321219741883
3 6:0.287916345044
3 7:0.293326084722
4 5:0.0217033903621
4 6:0.131791886721
4 7:0.116125054685
5 6:0.130984309896
5 7:0.116085457295
6 7:0.0409277936966
</hsp>