sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R1C-S6-Y2
X
>2IZN-S3-S9
X
>3R1C-O6-P2
X
>2FQN-A20-B2
X
>353D-A9-B3
X
>2O3V-A20-B2
X
>3HHN-C47-C50
X
</seq>
<hsp>
0 1:0.403472139926
0 2:0.302287860141
0 3:0.44437682117
0 4:0.36906336827
0 5:0.701413784475
0 6:0.999999900291
1 2:0.513438783788
1 3:0.379881974528
1 4:0.349238796548
1 5:0.575619773424
1 6:0.820648097942
2 3:0.329678999857
2 4:0.260075523644
2 5:0.537124655788
2 6:0.816653080567
3 4:0.218335924608
3 5:0.407917600184
3 6:0.657619404966
4 5:0.371362217243
4 6:0.662436755806
5 6:0.334042123826
</hsp>