sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCV-01718-01771
X
>3CME-01718-01771
X
>1YJ9-01718-01771
X
>1YJN-01718-01771
X
>3G71-01718-01771
X
>3G6E-01718-01771
X
>2OTJ-01718-01771
X
>1VQ6-01718-01771
X
>3CPW-01718-01771
X
>1VQ9-01718-01771
X
>3CCM-01718-01771
X
>1YIT-01718-01771
X
</seq>
<hsp>
0 1:0.489283763285
0 2:0.776695531644
0 3:0.797081075213
0 4:0.625457365621
0 5:0.51392064147
0 6:0.539759055648
0 7:0.606986454779
0 8:0.644134367772
0 9:0.592815015503
0 10:0.556593657865
0 11:0.772465234837
1 2:0.939794242039
1 3:0.967404921092
1 4:0.629237246492
1 5:0.68426356736
1 6:0.810072542392
1 7:0.833747991675
1 8:0.737178529156
1 9:0.724736958663
1 10:0.74513009117
1 11:0.85497991381
2 3:0.569280725719
2 4:0.516409525176
2 5:0.697860367116
2 6:0.699139875981
2 7:0.789320275083
2 8:0.745927912516
2 9:0.940070961453
2 10:0.694289102603
2 11:1.0
3 4:0.55405436441
3 5:0.580126139349
3 6:0.537888227251
3 7:0.489418996476
3 8:0.414632976953
3 9:0.56203830498
3 10:0.384732643102
3 11:0.58717707565
4 5:0.694647844938
4 6:0.751513566283
4 7:0.739766772789
4 8:0.628865607057
4 9:0.669866076253
4 10:0.568299081118
4 11:0.672941699397
5 6:0.235494262603
5 7:0.32353726198
5 8:0.301503728492
5 9:0.533612475398
5 10:0.43825188162
5 11:0.768011730371
6 7:0.357409877251
6 8:0.357623959276
6 9:0.557679412565
6 10:0.3507160726
6 11:0.736155461816
7 8:0.325256696264
7 9:0.394443203909
7 10:0.444953406908
7 11:0.646414850527
8 9:0.379630402072
8 10:0.30048765383
8 11:0.551378771656
9 10:0.396021591267
9 11:0.362727032576
10 11:0.454972189259
</hsp>