sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3D0U-A50-A48
X
>3DIY-A53-A51
X
>3DIL-A53-A51
X
>3DIO-X53-X51
X
>3DIZ-A53-A51
X
>3DJ0-A53-A51
X
>3DJ2-A53-A51
X
>3DIX-A53-A51
X
>3DIR-A53-A51
X
>3DIM-A53-A51
X
>3DIQ-A53-A51
X
</seq>
<hsp>
0 1:0.437807018639
0 2:0.382229657834
0 3:0.57612359214
0 4:0.594454506385
0 5:0.467091193345
0 6:0.482456628692
0 7:0.959640353817
0 8:0.53918658244
0 9:0.75426940358
0 10:0.779243047881
1 2:0.22946745509
1 3:0.496815681947
1 4:0.349418443687
1 5:0.346578285459
1 6:0.317734878419
1 7:0.983558974306
1 8:0.560916837599
1 9:0.737740806495
1 10:0.784577226133
2 3:0.360683894932
2 4:0.451667050756
2 5:0.37369141869
2 6:0.372575753697
2 7:1.0
2 8:0.4993698018
2 9:0.75395989146
2 10:0.835704568887
3 4:0.702837361938
3 5:0.661597208479
3 6:0.521455274011
3 7:0.959001491439
3 8:0.492507768512
3 9:0.810033186754
3 10:0.906165620478
4 5:0.237211082952
4 6:0.367731808958
4 7:0.936158245055
4 8:0.66609906373
4 9:0.611396822031
4 10:0.7115342683
5 6:0.304063036821
5 7:0.882745383453
5 8:0.547166759367
5 9:0.55725194725
5 10:0.646195726617
6 7:0.752207273627
6 8:0.451463898642
6 9:0.497221983108
6 10:0.572053458544
7 8:0.5865344441
7 9:0.373172011147
7 10:0.313522015895
8 9:0.480695631868
8 10:0.503013662714
9 10:0.243665597931
</hsp>