sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3DIM-A42-A93
X
>3DIR-A42-A93
X
>3DJ0-A42-A93
X
>3D0U-A39-A90
X
>3DIX-A42-A93
X
>3DIZ-A42-A93
X
>3DIG-X42-X93
X
>3DIY-A42-A93
X
>3DIO-X42-X93
X
>3DIQ-A42-A93
X
>3D0X-A39-A90
X
</seq>
<hsp>
0 1:0.736959068003
0 2:0.480785614519
0 3:0.579888907728
0 4:0.448632712287
0 5:0.381000862949
0 6:0.345935694507
0 7:0.516784329091
0 8:0.467760159984
0 9:0.477960425423
0 10:0.772402696808
1 2:0.734529263494
1 3:1.0
1 4:0.495052548334
1 5:0.46702426878
1 6:0.520630709004
1 7:0.551894385148
1 8:0.538036218854
1 9:0.549640582079
1 10:0.998377972465
2 3:0.63485756149
2 4:0.392968105602
2 5:0.445217879576
2 6:0.526925859281
2 7:0.565918711748
2 8:0.325517723786
2 9:0.409579772304
2 10:0.878075395905
3 4:0.574062067448
3 5:0.60815208506
3 6:0.536010132396
3 7:0.48343667151
3 8:0.587202176374
3 9:0.48356955088
3 10:0.672035170687
4 5:0.272472339316
4 6:0.272235085288
4 7:0.25476908062
4 8:0.237452889577
4 9:0.198473263586
4 10:0.852839504907
5 6:0.177693741489
5 7:0.298198289822
5 8:0.24451005483
5 9:0.246635096064
5 10:0.696365601221
6 7:0.230108538958
6 8:0.312261583872
6 9:0.247326415445
6 10:0.682753589854
7 8:0.360434045389
7 9:0.202434025436
7 10:0.702060441713
8 9:0.179110391848
8 10:0.764374982604
9 10:0.68709786342
</hsp>