sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1GAX-D57-D58
X
>1IVS-D57-D58
X
>1GAX-C57-C58
X
>1IVS-C57-C58
X
>3CCR-01110-01108
X
>2CT8-C59-C60
X
>3R8N-A482-A484
X
</seq>
<hsp>
0 1:0.424343944711
0 2:0.463541027134
0 3:0.351277227213
0 4:0.909955720612
0 5:0.683144622338
0 6:0.984184274445
1 2:0.179860401709
1 3:0.281271107059
1 4:0.931830823107
1 5:0.714413743232
1 6:1.0
2 3:0.337669293907
2 4:0.84664130311
2 5:0.798388382865
2 6:0.993382494936
3 4:0.919101763692
3 5:0.641523300234
3 6:0.983223324078
4 5:0.851310357453
4 6:0.633776010371
5 6:0.707320560355
</hsp>