sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A1324-A1351
X
>1VQK-01918-01956
X
>3CD6-01918-01956
X
>3OHJ-A1847-A1885
X
>3CD6-978-9102
X
>3CCS-01918-01956
X
>3I56-978-9102
X
>3CCR-0202-0214
X
>3CC7-978-9102
X
>3OHZ-B103-B72
X
>3IVN-A20-A51
X
>3F1F-A1371-A1397
X
>1K8A-B78-B102
X
>3R8S-A2289-A2328
X
>3CCS-0347-0281
X
>3G71-0347-0281
X
>3G6E-0202-0214
X
</seq>
<hsp>
0 1:0.599519673411
0 2:0.532434194267
0 3:0.413697920293
0 4:0.27514928245
0 5:0.559358791696
0 6:0.358845829402
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14 15:0.177823466949
14 16:0.379226010474
15 16:0.234150594579
</hsp>