sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHY-A169-A196
X
>3KNI-A1943-A1948
X
>1DK1-B15-B51
X
>3CC2-02176-02210
X
>1JJ2-02176-02210
X
>3OH5-A2467-A2607
X
>1XMQ-A427-A474
X
>2VQE-A630-A731
X
>1FUF-A5-B3
X
>3OI0-A313-A317
X
>1MHK-L6-S7
X
>3OHY-A1291-A1295
X
</seq>
<hsp>
0 1:0.388776618232
0 2:0.511705140257
0 3:0.401304421766
0 4:0.399619544644
0 5:0.50208560329
0 6:0.444349910232
0 7:0.670777248129
0 8:0.590719069607
0 9:0.591606536254
0 10:0.777619964364
0 11:0.999997874788
1 2:0.441351067898
1 3:0.405444400234
1 4:0.383536664024
1 5:0.429883421128
1 6:0.248715109235
1 7:0.641653522254
1 8:0.537465222397
1 9:0.388884917265
1 10:0.703709260605
1 11:0.899642723785
2 3:0.194120751291
2 4:0.216374184868
2 5:0.22623415638
2 6:0.418704812198
2 7:0.263200807148
2 8:0.257927792717
2 9:0.348148299089
2 10:0.756521266119
2 11:0.94623499308
3 4:0.0669498670926
3 5:0.322340522891
3 6:0.400185871696
3 7:0.325063172844
3 8:0.328239070993
3 9:0.433732116647
3 10:0.703179314401
3 11:0.943371717285
4 5:0.336754655048
4 6:0.362015192579
4 7:0.348517899846
4 8:0.343445253687
4 9:0.43140829842
4 10:0.646898807742
4 11:0.904489187576
5 6:0.392129119645
5 7:0.330534994669
5 8:0.21550143915
5 9:0.225859426249
5 10:0.785952120037
5 11:0.882509129886
6 7:0.562784739108
6 8:0.447549557795
6 9:0.317644146584
6 10:0.507846144213
6 11:0.670285814539
7 8:0.194222500118
7 9:0.441281517643
7 10:0.792012993
7 11:0.922760011788
8 9:0.297356437234
8 10:0.752926926654
8 11:0.833876254377
9 10:0.741789574961
9 11:0.77082198124
10 11:0.49277022208
</hsp>