sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A652-A670
X
>1VQ5-0652-0670
X
>1Q86-A652-A670
X
>3CD6-0652-0670
X
>1VQ9-0652-0670
X
>1VQN-0652-0670
X
>1VQO-0652-0670
X
>3CCL-0652-0670
X
>3I56-0652-0670
X
</seq>
<hsp>
0 1:0.616047140713
0 2:0.757525223356
0 3:0.45594901381
0 4:0.89389917562
0 5:0.677143716073
0 6:0.749787386718
0 7:0.723817444587
0 8:0.988978278611
1 2:0.34666030663
1 3:0.339104950676
1 4:0.63152891843
1 5:0.606581754952
1 6:0.669832896966
1 7:0.543546726182
1 8:0.766539716199
2 3:0.418001591557
2 4:0.767318429408
2 5:0.798392002695
2 6:0.88367517025
2 7:0.533129107801
2 8:0.596965074846
3 4:0.558406710908
3 5:0.47576654709
3 6:0.575688087022
3 7:0.499608788597
3 8:0.711085471712
4 5:0.38684731198
4 6:0.344042830079
4 7:0.745122380519
4 8:0.885149362302
5 6:0.207487411247
5 7:0.680773745102
5 8:0.950236437069
6 7:0.754205461802
6 8:0.999998380631
7 8:0.391779217657
</hsp>