sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1O0B-B51-B55
X
>3KNH-A485-A502
X
>2J00-A664-A682
X
>3F1E-A664-A682
X
>3KNI-A1006-A1110
X
>2DU4-C52-C56
X
>1YJ9-0469-0473
X
>3F1E-A494-A511
X
</seq>
<hsp>
0 1:0.873220203098
0 2:0.577189912963
0 3:0.646203980039
0 4:0.883888034591
0 5:0.885830816501
0 6:0.771855147757
0 7:0.99999844586
1 2:0.365045246919
1 3:0.415931047068
1 4:0.405485335803
1 5:0.325216730163
1 6:0.238363344193
1 7:0.361107459547
2 3:0.213153324742
2 4:0.396231321005
2 5:0.421688884215
2 6:0.250447390889
2 7:0.473068522418
3 4:0.475521080396
3 5:0.422272279106
3 6:0.239640436957
3 7:0.438879808109
4 5:0.357419606637
4 6:0.353685947039
4 7:0.314467278902
5 6:0.274993056148
5 7:0.300370241143
6 7:0.277263752162
</hsp>