sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-5214-5218
X
>3CCL-0323-0327
X
>3CD6-0323-0327
X
>3OHY-A476-A525
X
>3F1H-A2621-A2761
X
>3I56-02088-02104
X
>2QA4-01502-01598
X
</seq>
<hsp>
0 1:0.246826545748
0 2:0.417950648619
0 3:0.743198314396
0 4:0.747825879459
0 5:0.68940492288
0 6:0.794512494163
1 2:0.218976282042
1 3:0.911541887508
1 4:0.823975804206
1 5:0.814732726876
1 6:0.917835848704
2 3:1.0
2 4:0.869630685673
2 5:0.929235320187
2 6:0.956776509111
3 4:0.469092405927
3 5:0.387267997476
3 6:0.337399721254
4 5:0.393697296972
4 6:0.421830309761
5 6:0.468963097757
</hsp>