sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHY-A1124-A1104
X
>3OI0-A1124-A1104
X
>3OGE-A1124-A1104
X
>3OGY-A1124-A1104
X
>3OHC-A1124-A1104
X
>3OHD-A1124-A1104
X
>2J02-A1124-A1104
X
>2J00-A1124-A1104
X
</seq>
<hsp>
0 1:0.0532031517932
0 2:0.514732404623
0 3:0.532630078637
0 4:0.509529011976
0 5:0.524884735724
0 6:0.977552289443
0 7:1.0
1 2:0.485238011357
1 3:0.501922113965
1 4:0.505675880637
1 5:0.520420730671
1 6:0.947711865844
1 7:0.969713869942
2 3:0.0454461307163
2 4:0.625134521446
2 5:0.632403454772
2 6:0.839987281568
2 7:0.857151666148
3 4:0.61428719923
3 5:0.619842607233
3 6:0.807809684126
3 7:0.824623592795
4 5:0.0288614907739
4 6:0.708665797967
4 7:0.725877833666
5 6:0.693849606278
5 7:0.711043292945
6 7:0.0391918091414
</hsp>