sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1HR2-A21-A98
X
>1HR2-B22-B99
X
>2R8S-R22-R99
X
>2ZZM-B21-B14
X
>1H3E-B19-B14
X
>1GID-B21-B98
X
>1GID-A21-A98
X
</seq>
<hsp>
0 1:0.12568035713
0 2:0.514058421162
0 3:0.938108745976
0 4:0.914895053749
0 5:0.597166273322
0 6:0.481978060768
1 2:0.492400945758
1 3:0.999999813932
1 4:0.983968873164
1 5:0.611929526541
1 6:0.516316206668
2 3:0.913712971039
2 4:0.767853674914
2 5:0.256031923914
2 6:0.358696331342
3 4:0.414438672213
3 5:0.738175725499
3 6:0.758964957708
4 5:0.554119612366
4 6:0.641864458744
5 6:0.290313442553
</hsp>