sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-52718-52228
X
>1Q81-A2472-A2062
X
>1VQ8-02472-02062
X
>3G71-02472-02062
X
>3CCQ-02472-02062
X
>1FFK-02425-02015
X
>1YHQ-01926-01954
X
>2OTJ-01926-01954
X
>3CPW-01926-01954
X
>1Q81-A1926-A1954
X
>1FFK-01879-01907
X
</seq>
<hsp>
0 1:0.49712575039
0 2:0.376584481725
0 3:0.425902334498
0 4:0.368758383498
0 5:0.322535834686
0 6:0.85588952482
0 7:0.914030994245
0 8:0.772546888997
0 9:1.0
0 10:0.844917665528
1 2:0.265584655616
1 3:0.151148991167
1 4:0.201656231013
1 5:0.261155527457
1 6:0.64206942272
1 7:0.683145440643
1 8:0.604566830643
1 9:0.74810687994
1 10:0.780418526629
2 3:0.272532510065
2 4:0.223357940424
2 5:0.15160383542
2 6:0.829940573449
2 7:0.861575838932
2 8:0.760730003866
2 9:0.919173868487
2 10:0.884941484616
3 4:0.127287448044
3 5:0.241419889095
3 6:0.627018662495
3 7:0.665455467775
3 8:0.585062444202
3 9:0.751407989265
3 10:0.738381489152
4 5:0.141125658708
4 6:0.666374849129
4 7:0.711803720993
4 8:0.6005327506
4 9:0.780505872638
4 10:0.722941029416
5 6:0.738112110278
5 7:0.782894937302
5 8:0.655078014577
5 9:0.837879122869
5 10:0.763198126392
6 7:0.138848745677
6 8:0.143719714213
6 9:0.233538238054
6 10:0.347673851371
7 8:0.222697644254
7 9:0.178178919398
7 10:0.388407517793
8 9:0.271106862082
8 10:0.253569139996
9 10:0.378549006857
</hsp>