sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCE-01017-02332
X
>1VQN-01017-02332
X
>3CME-01017-02332
X
>3U5D-1992-12384
X
>1VQO-01017-02332
X
>1NJI-A1017-A2332
X
>1Q86-A1017-A2332
X
>3CCV-01017-02332
X
>1YJN-01017-02332
X
>3CCS-01017-02332
X
>3CCJ-02615-02415
X
>2ZJR-X2674-X2417
X
>3G78-A47-A167
X
>3OHJ-A2595-A2353
X
>3OH7-A2595-A2353
X
>2ZJR-X2552-X2310
X
</seq>
<hsp>
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0 2:0.307239300537
0 3:0.469841993391
0 4:0.179007086059
0 5:0.214588306288
0 6:0.256424779152
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0 10:0.489063229331
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0 14:0.894750321106
0 15:0.85229319074
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1 10:0.593863460189
1 11:0.691208935779
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1 14:0.998270703803
1 15:0.940332799775
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12 13:0.233877705899
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12 15:0.300610324375
13 14:0.215846608084
13 15:0.358170945709
14 15:0.264910678784
</hsp>