sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A1029-A2316
X
>1N8R-A192-A178
X
>3OI1-A1029-A2316
X
>3R8O-A1373-A937
X
>3G78-A190-A126
X
>3G9C-S122-S44
X
>2UUB-A1352-A911
X
>3KNH-A1343-A902
X
>2QUW-B41-B21
X
</seq>
<hsp>
0 1:0.420365968719
0 2:0.0569617661361
0 3:0.897385658114
0 4:0.692908556446
0 5:0.909557703672
0 6:0.738475164706
0 7:0.910942976468
0 8:0.999999135545
1 2:0.40339586408
1 3:0.798596082447
1 4:0.463367308729
1 5:0.668945588594
1 6:0.644364407477
1 7:0.64277241134
1 8:0.789344924497
2 3:0.868376456256
2 4:0.662196786064
2 5:0.881730885529
2 6:0.703569088103
2 7:0.879149570765
2 8:0.96464326271
3 4:0.53509507195
3 5:0.68045928099
3 6:0.263882087514
3 7:0.474707762263
3 8:0.367449922424
4 5:0.36868900433
4 6:0.377231216815
4 7:0.517172936005
4 8:0.532734953857
5 6:0.563286680077
5 7:0.662645628742
5 8:0.554874447548
6 7:0.490550253911
6 8:0.393979439526
7 8:0.324214348949
</hsp>