sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ9-0174-0172
X
>1YHQ-0174-0172
X
>3G6E-0174-0172
X
>2QEX-0174-0172
X
>1VQN-0174-0172
X
>3CMA-0174-0172
X
>3CCV-0174-0172
X
>1NJI-A174-A172
X
</seq>
<hsp>
0 1:0.412247274797
0 2:0.621615357209
0 3:0.594786079104
0 4:0.382050617333
0 5:0.490185287396
0 6:0.689753333681
0 7:0.999998718833
1 2:0.33314846073
1 3:0.480614535719
1 4:0.308988705981
1 5:0.298277167974
1 6:0.481170850342
1 7:0.782162282319
2 3:0.430306363258
2 4:0.488478781491
2 5:0.380591659639
2 6:0.397919857638
2 7:0.624790036093
3 4:0.591682511157
3 5:0.602034172431
3 6:0.651852409182
3 7:0.786091098996
4 5:0.281564435861
4 6:0.428257920568
4 7:0.691609348197
5 6:0.411948087486
5 7:0.647667607206
6 7:0.572449700683
</hsp>