sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH7-A358-A72
X
>3OI1-A358-A72
X
>3SUH-X24-X21
X
>3OHZ-A1168-A560
X
>3OH5-A1168-A560
X
>3OH7-A1168-A560
X
>3F1F-A1238-A569
X
</seq>
<hsp>
0 1:0.204192780358
0 2:0.852300947578
0 3:0.905215961459
0 4:0.721400496721
0 5:0.670239801928
0 6:0.855093873356
1 2:0.76986683231
1 3:0.83761495332
1 4:0.604401205612
1 5:0.568810239188
1 6:0.761161857161
2 3:0.938674009887
2 4:0.668771785197
2 5:0.680429979779
2 6:1.0
3 4:0.508678396048
3 5:0.49068191814
3 6:0.645013464912
4 5:0.0893758806747
4 6:0.410854434082
5 6:0.422658298134
</hsp>