sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61775-61636
X
>3F1G-A1490-A1382
X
>3OHC-A1490-A1382
X
>3OHD-A1490-A1382
X
>1N32-A1490-A1382
X
>1XMQ-A1484-A1376
X
</seq>
<hsp>
0 1:0.951395945578
0 2:0.674799705509
0 3:0.686643139456
0 4:0.597842056592
0 5:0.714615025424
1 2:1.0
1 3:0.990084933238
1 4:0.497031001627
1 5:0.536274740932
2 3:0.066734434604
2 4:0.676820513362
2 5:0.747076732273
3 4:0.664512423315
3 5:0.738717207348
4 5:0.334090243811
</hsp>