sequences=15
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Z43-A27-A70
X
>3KNK-A2436-A2563
X
>1YJ9-0443-0439
X
>3G71-02407-02534
X
>2OTL-02407-02534
X
>1YJ9-02407-02534
X
>3CCV-02407-02534
X
>1VQ8-02407-02534
X
>3CC2-02407-02534
X
>1YIJ-02407-02534
X
>1FFK-02360-02486
X
>1YJN-02407-02534
X
>1K8A-A2407-A2534
X
>1VQ6-02407-02534
X
>1NJI-A2407-A2534
X
</seq>
<hsp>
0 1:0.979275455914
0 2:0.999997879525
0 3:0.972338530726
0 4:0.823447827031
0 5:0.843431974022
0 6:0.965585589929
0 7:0.89697340336
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0 9:0.856250256647
0 10:0.979493695693
0 11:0.862623940406
0 12:0.95166337897
0 13:0.863960428767
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1 2:0.769507079204
1 3:0.681484740358
1 4:0.664065215818
1 5:0.729612827114
1 6:0.736835751223
1 7:0.515266361869
1 8:0.768307390049
1 9:0.637346030974
1 10:0.57913161394
1 11:0.742430341152
1 12:0.769917696407
1 13:0.72762313459
1 14:0.722729231605
2 3:0.273413871404
2 4:0.379831921932
2 5:0.284160768554
2 6:0.234149710161
2 7:0.382826933552
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2 10:0.341611852757
2 11:0.1851440418
2 12:0.167803178495
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3 4:0.401996885815
3 5:0.263484916814
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3 7:0.251374160449
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3 9:0.228826143391
3 10:0.234487582654
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3 12:0.318554856411
3 13:0.276650552699
3 14:0.241490992021
4 5:0.280727949123
4 6:0.364434237731
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4 13:0.183014666571
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5 10:0.363252097821
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5 14:0.222912678875
6 7:0.309129597409
6 8:0.0871591717804
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6 10:0.290683699445
6 11:0.217202576687
6 12:0.226542860049
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7 14:0.323607513865
8 9:0.252118731936
8 10:0.301889464074
8 11:0.213187755568
8 12:0.242049737429
8 13:0.245394271913
8 14:0.18934490544
9 10:0.201920748514
9 11:0.22767916425
9 12:0.301955562946
9 13:0.14346366376
9 14:0.241550685369
10 11:0.324465226411
10 12:0.369605533045
10 13:0.276306248941
10 14:0.274400434837
11 12:0.121685855579
11 13:0.158660057058
11 14:0.131063681222
12 13:0.220798875884
12 14:0.103952745603
13 14:0.183992829242
</hsp>