sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XMQ-A11-A1052
X
>1N32-A11-A1057
X
>2VQE-A11-A1057
X
>2UUA-A11-A1057
X
>2UUB-A11-A1057
X
>3KNI-A1992-A2339
X
>3R8N-A14-A1078
X
>2J03-A1993-A2311
X
>3F1G-A11-A1057
X
>3F1E-A11-A1057
X
>2J01-A1993-A2311
X
>2VQE-A119-A253
X
>2UUB-A119-A253
X
>1FJG-A119-A253
X
</seq>
<hsp>
0 1:0.287321473109
0 2:0.289923843851
0 3:0.380173954915
0 4:0.392572607015
0 5:0.583378749384
0 6:0.305590099682
0 7:0.984723401199
0 8:0.77982651041
0 9:0.792008437617
0 10:1.0
0 11:0.820413019253
0 12:0.870429079115
0 13:0.869820962995
1 2:0.111071356039
1 3:0.223782931806
1 4:0.145850994372
1 5:0.485321402547
1 6:0.258793517956
1 7:0.775519058793
1 8:0.614106292925
1 9:0.621041205627
1 10:0.794148702097
1 11:0.636229263961
1 12:0.685029865589
1 13:0.689634782887
2 3:0.181213296462
2 4:0.130175490738
2 5:0.566051994779
2 6:0.22740302225
2 7:0.769263411871
2 8:0.544354650297
2 9:0.553499767019
2 10:0.788710585065
2 11:0.665212097511
2 12:0.710054994386
2 13:0.718134775722
3 4:0.185782074645
3 5:0.643665479965
3 6:0.296032107653
3 7:0.66069144063
3 8:0.536968509875
3 9:0.540732822196
3 10:0.683962734394
3 11:0.665694803843
3 12:0.740539194515
3 13:0.72631101311
4 5:0.549049284706
4 6:0.306224056021
4 7:0.686411216409
4 8:0.517027331957
4 9:0.521813974883
4 10:0.708265195062
4 11:0.598946860584
4 12:0.637472976199
4 13:0.65129201304
5 6:0.542848245771
5 7:0.901976741918
5 8:0.883690578303
5 9:0.885421586612
5 10:0.901029926587
5 11:0.499186522034
5 12:0.513005112341
5 13:0.511039776971
6 7:0.777446240542
6 8:0.543147410473
6 9:0.555198663185
6 10:0.789515361193
6 11:0.63188012014
6 12:0.694453255663
6 13:0.678762432009
7 8:0.586146004386
7 9:0.564670419222
7 10:0.0559803913985
7 11:0.616084715881
7 12:0.688227918241
7 13:0.619483934328
8 9:0.0302131001788
8 10:0.599084678841
8 11:0.696825971095
8 12:0.703270616617
8 13:0.709072412897
9 10:0.577121852144
9 11:0.689056307865
9 12:0.695770868391
9 13:0.699815236189
10 11:0.61389733644
10 12:0.682254588604
10 13:0.609232544331
11 12:0.189572362575
11 13:0.124587231789
12 13:0.142743017857
</hsp>