sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A494-A512
X
>3OHZ-A494-A512
X
>3OH7-A494-A512
X
>3OI1-A494-A512
X
>2VQE-A346-A358
X
>2J00-A1336-A1291
X
>3OGE-A1336-A1291
X
>3U5F-6424-6436
X
>1XMQ-A346-A358
X
>3KNH-A1327-A1282
X
>3OHD-A1336-A1291
X
</seq>
<hsp>
0 1:0.221593143225
0 2:0.0770830704139
0 3:0.274720278831
0 4:0.921551193492
0 5:0.970377703099
0 6:0.810241619178
0 7:0.766500171091
0 8:0.911860876392
0 9:0.724840296774
0 10:0.787534596483
1 2:0.189084041879
1 3:0.0668108098609
1 4:0.9728206205
1 5:1.0
1 6:0.824726416628
1 7:0.862865031121
1 8:0.943930916304
1 9:0.753888169878
1 10:0.792462857799
2 3:0.233053936459
2 4:0.902146188122
2 5:0.950442716317
2 6:0.782525653132
2 7:0.754631052606
2 8:0.893977681851
2 9:0.70468419397
2 10:0.761018957498
3 4:0.968923883095
3 5:0.990971140933
3 6:0.814430293002
3 7:0.872240868273
3 8:0.937139934363
3 9:0.747439629326
3 10:0.780939440855
4 5:0.217599260034
4 6:0.467018388571
4 7:0.365581186327
4 8:0.31291605641
4 9:0.381954405313
4 10:0.418660206563
5 6:0.407580281497
5 7:0.457365390261
5 8:0.23453565065
5 9:0.319943901616
5 10:0.333253860257
6 7:0.500009346429
6 8:0.480338440595
6 9:0.384225919922
6 10:0.357807655815
7 8:0.387464770708
7 9:0.363671306692
7 10:0.422179237886
8 9:0.232832007426
8 10:0.233053402513
9 10:0.148629128474
</hsp>