sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3HL2-E79-E78
X
>3F1H-A865-A864
X
>3F1F-A865-A864
X
>3CMA-01887-01886
X
>3U5H-52116-52115
X
>1VQO-01887-01886
X
>3CCM-01887-01886
X
>1VQ8-01887-01886
X
</seq>
<hsp>
0 1:0.530556347961
0 2:0.514512316896
0 3:0.755109373233
0 4:0.527756946555
0 5:0.71211302337
0 6:0.651099747561
0 7:0.701181003036
1 2:0.0444766326926
1 3:0.822524140182
1 4:0.464355601791
1 5:0.788431671479
1 6:0.733067353754
1 7:0.728545630205
2 3:0.815073598197
2 4:0.450747261397
2 5:0.780993695086
2 6:0.726605961945
2 7:0.720707621237
3 4:0.999999364702
3 5:0.153858472713
3 6:0.157955668447
3 7:0.158342416317
4 5:0.936772018135
4 6:0.896597163442
4 7:0.887942275413
5 6:0.0818298163531
5 7:0.152006534445
6 7:0.153864721302
</hsp>