ClaRNA

Doublet Group info: classifier/base-phosphate/W_3BPh/GA/sub-001

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: base-phosphate
Desc: W_3BPh/GA/sub-001
Members:
count: 69
download members
3GX2:A73:A76
3L3C:P108:P111
3CD6:01014:01017
3OI1:A2205:A2208
3IQN:A49:A52
3F1F:A650:A653
1Q81:B89:B92
3KNK:A1318:A1321
3CC7:01014:01017
3CCJ:01014:01017
1VQ6:989:992
3IQP:A49:A52
3NMU:D18:D21
3CCL:01014:01017
1YJ9:01014:01017
3OGY:A1242:A1245
1VQN:01014:01017
1QVG:01014:01017
3MXH:R24:R27
1VQ8:01014:01017
3KNH:A278:A281
1VQ9:0679:0682
1VQL:0679:0682
3CXC:01014:01017
3F1G:A1004:A1007
1YJW:01014:01017
3E5F:A18:A21
1YIT:989:992
1S72:0679:0682
2OTL:0679:0682
3CCU:0679:0682
3CCS:0679:0682
1VQP:0679:0682
1VQN:0679:0682
1VQO:0679:0682
1M5K:B74:B77
1VQL:02095:02098
1VQO:02095:02098
1VQ6:0679:0682
1FFK:0678:0681
1FJG:A287:A290
3CC2:02095:02098
1N32:A287:A290
3CPW:0679:0682
1VQ4:02095:02098
1VQ5:0679:0682
3GX5:A49:A52
3CCR:01587:01590
1VQ9:0792:0795
1Q81:A1014:A1017
483D:A12:A15
1VQ4:0679:0682
1VQP:02095:02098
3MOJ:A22:A25
1YIJ:0679:0682
3I56:01821:01824
3DW5:A12:A15
1YI2:02095:02098
3OXM:A49:A52
2VQF:A287:A290
1HR2:A47:A50
3I56:989:992
3CXC:02095:02098
2QEX:01014:01017
3U5H:52779:52782
1Q86:A2095:A2098
1YJW:01821:01824
2OTJ:01821:01824
3G6E:01821:01824
Closest classifer groups: show all      show selected
Group Members RMSD
bp/HS_tran 14 0.047
base-phosphate/W_3BPh 2382 0.105
bp/SH_tran 76 0.268
bp/SW_tran 65 0.276
bp/SH_cis 11 0.297
bp/WS_tran 12 0.302
bp/HS_cis 52 0.343
base-ribose/W_6BR 49 0.384
bp/WS_cis 1 0.435
bp/SS_tran 73 0.465

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol