sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A746-A725
X
>3CCV-01443-01418
X
>1VQL-01866-01889
X
>2J03-A1185-A1161
X
>2J00-A1394-A1455
X
>3R8S-A2358-A2345
X
>3OHK-A1074-A1030
X
>3CCM-01866-01889
X
>3CCS-01443-01418
X
>2J00-A584-A610
X
>1FJG-A584-A610
X
>3OI0-A1394-A1455
X
>1K9M-A1173-A1111
X
>2ZJR-X1342-X1490
X
>2GIS-A18-A35
X
>3KNI-A1221-A1928
X
</seq>
<hsp>
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0 2:0.22728812585
0 3:0.0811161683237
0 4:0.286105918347
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13 15:0.915306890037
14 15:0.99999971099
</hsp>