sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A419-A465
X
>2QA4-0519-01
X
>3OGY-A1280-A1308
X
>3KNI-A1178-A1181
X
>3KNH-A1283-A1286
X
>2QA4-02252-02255
X
>1VQ9-02471-02474
X
>3CCE-0565-0568
X
>3F1G-A1054-A1057
X
>3OHJ-A641-A644
X
>2H0Z-B91-B94
X
>1YIT-0565-0568
X
>3I56-0565-0568
X
>1YJW-0565-0568
X
>1Q86-A565-A568
X
>1VQ6-0565-0568
X
</seq>
<hsp>
0 1:0.950643665838
0 2:0.930995883995
0 3:0.794018532381
0 4:0.329605764287
0 5:0.720876336897
0 6:0.66608706596
0 7:0.723436567539
0 8:0.739901275441
0 9:0.651793868927
0 10:0.732294010326
0 11:0.761856447573
0 12:0.740127071961
0 13:0.742131246754
0 14:0.757718130273
0 15:0.743903054398
1 2:0.643094676433
1 3:0.329299337892
1 4:0.81572743377
1 5:0.342644466379
1 6:0.370225111373
1 7:0.331131109945
1 8:0.28640395336
1 9:0.390254544205
1 10:0.311041863547
1 11:0.334414855672
1 12:0.340269315877
1 13:0.324787675005
1 14:0.3221105933
1 15:0.32791620898
2 3:0.610227704166
2 4:0.999997250916
2 5:0.745453459738
2 6:0.536148240397
2 7:0.554688546543
2 8:0.615895278485
2 9:0.673197455483
2 10:0.571795003239
2 11:0.589210728609
2 12:0.550364013704
2 13:0.545386710633
2 14:0.585208944915
2 15:0.56260803456
3 4:0.679467831798
3 5:0.304111077491
3 6:0.17042230235
3 7:0.168360684424
3 8:0.154953154369
3 9:0.34178916026
3 10:0.150224808705
3 11:0.0939163694963
3 12:0.165074988385
3 13:0.14835000699
3 14:0.107196240463
3 15:0.100665211213
4 5:0.563067073031
4 6:0.598770610606
4 7:0.639768285232
4 8:0.621043156689
4 9:0.541591304251
4 10:0.636578803448
4 11:0.658313227584
4 12:0.657067049285
4 13:0.657388237024
4 14:0.654296542681
4 15:0.648900650127
5 6:0.267876663223
5 7:0.234385944736
5 8:0.173013330764
5 9:0.145458793907
5 10:0.215832782097
5 11:0.256731646709
5 12:0.253034442093
5 13:0.254336368242
5 14:0.246775010398
5 15:0.267356339089
6 7:0.0939006501792
6 8:0.134600443996
6 9:0.240774031268
6 10:0.0958522517467
6 11:0.124303442751
6 12:0.108666995791
6 13:0.0988253491824
6 14:0.119822019038
6 15:0.0983622006877
7 8:0.0925709980655
7 9:0.213060324914
7 10:0.0395947283433
7 11:0.0939019092102
7 12:0.0341662222366
7 13:0.0313648085033
7 14:0.072638467098
7 15:0.0799768951703
8 9:0.195851167683
8 10:0.0627923706773
8 11:0.0982246719421
8 12:0.105634436415
8 13:0.0978251642901
8 14:0.0850377088542
8 15:0.100436796017
9 10:0.208755414665
9 11:0.270679850863
9 12:0.229573360761
9 13:0.238266078158
9 14:0.255192630787
9 15:0.266981873223
10 11:0.0788761169686
10 12:0.0543885442927
10 13:0.0459190765372
10 14:0.0607912361006
10 15:0.0696099035945
11 12:0.0831307848552
11 13:0.0757029382627
11 14:0.0316107467987
11 15:0.0450743753736
12 13:0.0265439200764
12 14:0.0646206518217
12 15:0.0741126412896
13 14:0.0543146022767
13 15:0.0575872825313
14 15:0.0377019288989
</hsp>