sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ8-0302-0305
X
>3OH7-A490-A493
X
>3KNI-A513-A516
X
>3R8O-A322-A325
X
>3OI1-A490-A493
X
>3CCM-0302-0305
X
>1FFK-0301-0304
X
>1YIJ-0302-0305
X
>3CCQ-0302-0305
X
>3D2X-B27-B30
X
>2GDI-Y30-Y33
X
>3D2V-B27-B30
X
>3R8S-A475-A478
X
</seq>
<hsp>
0 1:0.355024797933
0 2:0.491350569927
0 3:0.709765902923
0 4:0.371994686602
0 5:0.115206724523
0 6:0.213478492667
0 7:0.168853546789
0 8:0.135914658807
0 9:0.628886584655
0 10:0.618574558848
0 11:0.472915249177
0 12:0.218736580925
1 2:0.64350591993
1 3:0.952289402392
1 4:0.192292615803
1 5:0.332509266497
1 6:0.428535928084
1 7:0.457118287749
1 8:0.426241262858
1 9:0.750027903896
1 10:0.80037173793
1 11:0.6152282181
1 12:0.35052008004
2 3:0.519244205974
2 4:0.667683692329
2 5:0.553711841705
2 6:0.468684437879
2 7:0.540079985832
2 8:0.506232440837
2 9:0.639154395794
2 10:0.560661217187
2 11:0.529305224261
2 12:0.612563598952
3 4:0.999997518313
3 5:0.781234127894
3 6:0.645309307024
3 7:0.741856758589
3 8:0.719231019695
3 9:0.500787145799
3 10:0.388016012309
3 11:0.498568953458
3 12:0.855405967113
4 5:0.306003696153
4 6:0.421658410589
4 7:0.414823286845
4 8:0.411463901397
4 9:0.851160499141
4 10:0.879628818238
4 11:0.708127673118
4 12:0.352901511997
5 6:0.20645451886
5 7:0.172259915031
5 8:0.16309498804
5 9:0.678063667201
5 10:0.676708340359
5 11:0.521768438821
5 12:0.190126064017
6 7:0.283206724081
6 8:0.281848248729
6 9:0.54040238192
6 10:0.522249725224
6 11:0.411159863114
6 12:0.347458576198
7 8:0.0963632671451
7 9:0.744961706968
7 10:0.717144839885
7 11:0.588386972136
7 12:0.254255566565
8 9:0.701253469451
8 10:0.679887489394
8 11:0.534919830771
8 12:0.209190130932
9 10:0.188491297534
9 11:0.207283789703
9 12:0.739479916758
10 11:0.231948535048
10 12:0.738506347807
11 12:0.560728650979
</hsp>