sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCR-01875-01880
X
>3F1H-A2151-A2128
X
>3G6E-02531-02541
X
>3CCE-02531-02541
X
>1Q82-A1547-A1564
X
>1YJW-02531-02541
X
>1YIJ-01547-01564
X
>3CCR-01547-01564
X
>3CCU-01547-01564
X
</seq>
<hsp>
0 1:0.471433743411
0 2:0.743268596885
0 3:0.772213946702
0 4:0.506363469302
0 5:0.756982026426
0 6:0.504901803221
0 7:0.49928057605
0 8:0.518896377698
1 2:0.965056756907
1 3:0.999998979989
1 4:0.198279688767
1 5:0.989321998033
1 6:0.188209143871
1 7:0.161354337941
1 8:0.178124936693
2 3:0.0472147556507
2 4:0.892357512309
2 5:0.0571997196472
2 6:0.896274822678
2 7:0.899923703848
2 8:0.912642745672
3 4:0.927338319754
3 5:0.0406220038621
3 6:0.931376046834
3 7:0.936959811743
3 8:0.948045404658
4 5:0.915361087594
4 6:0.0172671325701
4 7:0.0802387604025
4 8:0.0432031890426
5 6:0.919530285151
5 7:0.925350057528
5 8:0.937172627783
6 7:0.0704233094357
6 8:0.0316815722359
7 8:0.066580633657
</hsp>