sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1FJG-A99-A55
X
>3F1G-A99-A55
X
>3CCS-02419-02523
X
>1S72-02419-02523
X
>3CC7-02419-02523
X
>1VQK-02419-02523
X
>3CMA-02419-02523
X
</seq>
<hsp>
0 1:0.0774001760958
0 2:0.939815268984
0 3:0.940799913363
0 4:0.929643422214
0 5:0.961763715494
0 6:0.944183126303
1 2:0.977424113431
1 3:0.97938674363
1 4:0.968380949908
1 5:0.999999908724
1 6:0.982243319428
2 3:0.018984131285
2 4:0.0235775379445
2 5:0.0281466152381
2 6:0.0214280670759
3 4:0.0172459273486
3 5:0.0252283136561
3 6:0.0195861476752
4 5:0.0341749818627
4 6:0.0249802502558
5 6:0.0246146797104
</hsp>