sequences=19
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2H0S-B42-A2
X
>3B4A-B42-A2
X
>3L3C-S56-H2
X
>3B4B-B42-A0
X
>3L3C-R56-G2
X
>3B4C-B42-A0
X
>2NZ4-Q56-F2
X
>3L3C-Q56-F2
X
>2H0X-B42-A1
X
>2NZ4-R56-G2
X
>2GCS-B42-A1
X
>2HO7-B42-A1
X
>2H0Z-B42-A1
X
>2NZ4-S56-H2
X
>3AMT-B58-B19
X
>3OHK-A1420-A1471
X
>3OHJ-A1420-A1471
X
>2J03-A1420-A1471
X
>2J01-A1420-A1471
X
</seq>
<hsp>
0 1:0.0575304933573
0 2:0.117600682164
0 3:0.110695353329
0 4:0.118645813892
0 5:0.121392892154
0 6:0.0953132110828
0 7:0.0900937106897
0 8:0.0239194542381
0 9:0.119343188673
0 10:0.0343447099079
0 11:0.0632696947671
0 12:0.114290267509
0 13:0.100575796463
0 14:0.999999817131
0 15:0.888975761747
0 16:0.88937609148
0 17:0.909406994191
0 18:0.908992317429
1 2:0.0794297844892
1 3:0.0809767654805
1 4:0.076555821969
1 5:0.0844411585783
1 6:0.0617245194561
1 7:0.0565728955754
1 8:0.0435292569316
1 9:0.0844768660735
1 10:0.0332759957861
1 11:0.0391880954717
1 12:0.0720704918717
1 13:0.0595161105937
1 14:0.95969336543
1 15:0.856100234057
1 16:0.856321680215
1 17:0.87456635031
1 18:0.874147498984
2 3:0.0575024432642
2 4:0.0221268775494
2 5:0.0305768419138
2 6:0.0486855834682
2 7:0.0362973604624
2 8:0.103516308693
2 9:0.0361082798439
2 10:0.0913530057179
2 11:0.0672094850551
2 12:0.0523056059257
2 13:0.030690432813
2 14:0.892582068853
2 15:0.824848470253
2 16:0.824670958086
2 17:0.836828640828
2 18:0.836612851197
3 4:0.0505627721501
3 5:0.0425727098955
3 6:0.0348852469677
3 7:0.0409170864346
3 8:0.0917061920631
3 9:0.0381674108521
3 10:0.0803137971372
3 11:0.0552703239716
3 12:0.0298406499883
3 13:0.0483227216832
3 14:0.900414841701
3 15:0.842493792983
3 16:0.842368049867
3 17:0.856065878251
3 18:0.855819729307
4 5:0.0255783943027
4 6:0.0359358903329
4 7:0.0369251464537
4 8:0.101371743862
4 9:0.0255040512249
4 10:0.0889768384967
4 11:0.0617077792971
4 12:0.0384645394247
4 13:0.024488037232
4 14:0.894058739965
4 15:0.828766077249
4 16:0.828614736561
4 17:0.841888453889
4 18:0.841623300283
5 6:0.0397643587833
5 7:0.0389434377287
5 8:0.104606887081
5 9:0.0275923297156
5 10:0.0927003757815
5 11:0.0631895237112
5 12:0.0383331741032
5 13:0.0296030222419
5 14:0.892085031909
5 15:0.82714050951
5 16:0.826959538422
5 17:0.839940861355
5 18:0.839729907527
6 7:0.0308621601045
6 8:0.0752207437495
6 9:0.0304542661849
6 10:0.0637353813347
6 11:0.0347590554534
6 12:0.031397577469
6 13:0.0292153556672
6 14:0.917099700029
6 15:0.845979743947
6 16:0.845969079871
6 17:0.861588009891
6 18:0.861272346975
7 8:0.074745835845
7 9:0.0402692195286
7 10:0.0624604550316
7 11:0.0384075874315
7 12:0.0405391215819
7 13:0.0290834026129
7 14:0.919572213971
7 15:0.842163255643
7 16:0.842140415622
7 17:0.856825503343
7 18:0.856547271433
8 9:0.101051453559
8 10:0.0137862755736
8 11:0.0436921838933
8 12:0.0938137477784
8 13:0.08341958665
8 14:0.983496636709
8 15:0.881533106643
8 16:0.881864948032
8 17:0.901284722095
8 18:0.900866797152
9 10:0.0893266195472
9 11:0.0605161536894
9 12:0.0356994387852
9 13:0.0325718037692
9 14:0.891764111102
9 15:0.834095696884
9 16:0.833926852359
9 17:0.846649495591
9 18:0.846406549681
10 11:0.0331425923918
10 12:0.0812577510818
10 13:0.071148898949
10 14:0.971685076776
10 15:0.873263505383
10 16:0.8735330914
10 17:0.892228296805
10 18:0.891823034373
11 12:0.0544939737269
11 13:0.0444245790467
11 14:0.94718627991
11 15:0.860123636048
11 16:0.86026008751
11 17:0.87754639711
11 18:0.87719246784
12 13:0.0366198539702
12 14:0.901282239972
12 15:0.835215335043
12 16:0.835099707755
12 17:0.849278093842
12 18:0.848973238911
13 14:0.910572478736
13 15:0.833284420548
13 16:0.83320871955
13 17:0.847304347653
13 18:0.847028439579
14 15:0.819090784979
14 16:0.814319795414
14 17:0.75065301302
14 18:0.752078096553
15 16:0.00599277462804
15 17:0.0882134408574
15 18:0.0862809477267
16 17:0.0840174992985
16 18:0.0821169183036
17 18:0.00407307543359
</hsp>