sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VPL-B34-D27
X
>3KNH-A1145-A1148
X
>3KNI-A1426-A1477
X
>3OH5-A1420-A1471
X
>1JID-B12-B15
X
>3OH7-A1420-A1471
X
>3OI1-A1420-A1471
X
>3OHZ-A1420-A1471
X
</seq>
<hsp>
0 1:0.850758462121
0 2:0.999999710313
0 3:0.931192126319
0 4:0.587742206128
0 5:0.930635877873
0 6:0.977632990443
0 7:0.978468310299
1 2:0.67056122904
1 3:0.623964543377
1 4:0.726497512893
1 5:0.626178671651
1 6:0.639567423083
1 7:0.636868491185
2 3:0.108640428148
2 4:0.595378857816
2 5:0.109496688885
2 6:0.115655306999
2 7:0.118161901211
3 4:0.532522320249
3 5:0.00805294967167
3 6:0.0864354928781
3 7:0.0893434241948
4 5:0.529490955226
4 6:0.596378585055
4 7:0.598328449172
5 6:0.0899449124413
5 7:0.0928897402632
6 7:0.00813592854928
</hsp>