Doublet Group distance statistics: 53620

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Distances from reference structure (by RMSD)

2, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0,

RMS Distances matrix

Distances from reference structure (by atoms)

Atom	Chain	Distances
C6	A	0, 0.002, 0.006, 0.010, 0.011 max_d=0.011 avg_d=0.006 std_dev=0.004
N1	A	0, 0.002, 0.011, 0.020, 0.023 max_d=0.023 avg_d=0.011 std_dev=0.009
N9	A	0, 0.003, 0.013, 0.022, 0.027 max_d=0.027 avg_d=0.013 std_dev=0.010
C5	A	0, 0.006, 0.016, 0.027, 0.028 max_d=0.028 avg_d=0.016 std_dev=0.010
C8	A	0, 0.004, 0.016, 0.027, 0.029 max_d=0.029 avg_d=0.016 std_dev=0.011
N7	A	0, 0.007, 0.019, 0.032, 0.034 max_d=0.034 avg_d=0.019 std_dev=0.012
C4	A	0, 0.005, 0.017, 0.029, 0.035 max_d=0.035 avg_d=0.017 std_dev=0.012
C2	A	0, 0.001, 0.019, 0.037, 0.047 max_d=0.047 avg_d=0.019 std_dev=0.018
O6	A	0, 0.009, 0.028, 0.047, 0.053 max_d=0.053 avg_d=0.028 std_dev=0.019
N3	A	0, 0.002, 0.022, 0.041, 0.052 max_d=0.052 avg_d=0.022 std_dev=0.019
C1'	A	0, -0.002, 0.019, 0.040, 0.052 max_d=0.052 avg_d=0.019 std_dev=0.021
N2	A	0, -0.002, 0.044, 0.089, 0.113 max_d=0.113 avg_d=0.044 std_dev=0.045
OP2	B	0, -0.029, 0.231, 0.491, 0.658 max_d=0.658 avg_d=0.231 std_dev=0.260
OP1	B	0, 0.017, 0.487, 0.956, 1.054 max_d=1.054 avg_d=0.487 std_dev=0.469
P	B	0, 0.016, 0.755, 1.495, 1.537 max_d=1.537 avg_d=0.755 std_dev=0.739
O3'	A	0, 0.008, 1.221, 2.434, 2.480 max_d=2.480 avg_d=1.221 std_dev=1.213
O4'	A	0, 0.033, 1.324, 2.616, 2.671 max_d=2.671 avg_d=1.324 std_dev=1.291
C2'	A	0, 0.013, 1.360, 2.707, 2.729 max_d=2.729 avg_d=1.360 std_dev=1.347
C3'	A	0, 0.010, 1.534, 3.058, 3.131 max_d=3.131 avg_d=1.534 std_dev=1.524
C4'	A	0, 0.010, 1.612, 3.214, 3.344 max_d=3.344 avg_d=1.612 std_dev=1.602
O5'	B	0, 0.032, 2.034, 4.036, 4.062 max_d=4.062 avg_d=2.034 std_dev=2.002
O2'	A	0, 0.029, 2.191, 4.352, 4.378 max_d=4.378 avg_d=2.191 std_dev=2.161
C5'	A	0, 0.017, 2.985, 5.952, 6.115 max_d=6.115 avg_d=2.985 std_dev=2.967
C5'	B	0, 0.029, 3.159, 6.290, 6.325 max_d=6.325 avg_d=3.159 std_dev=3.131
O5'	A	0, 0.021, 3.324, 6.628, 6.712 max_d=6.712 avg_d=3.324 std_dev=3.303
C8	B	0, -0.003, 3.305, 6.612, 7.249 max_d=7.249 avg_d=3.305 std_dev=3.308
N7	B	0, 0.025, 3.382, 6.739, 7.000 max_d=7.000 avg_d=3.382 std_dev=3.357
O4'	B	0, -0.066, 3.821, 7.709, 8.874 max_d=8.874 avg_d=3.821 std_dev=3.887
C5	B	0, -0.074, 3.938, 7.951, 9.110 max_d=9.110 avg_d=3.938 std_dev=4.012
C4'	B	0, 0.020, 4.080, 8.141, 8.367 max_d=8.367 avg_d=4.080 std_dev=4.060
N9	B	0, -0.109, 3.975, 8.058, 9.414 max_d=9.414 avg_d=3.975 std_dev=4.084
O6	B	0, 0.014, 4.258, 8.503, 8.781 max_d=8.781 avg_d=4.258 std_dev=4.245
C6	B	0, -0.078, 4.289, 8.656, 9.877 max_d=9.877 avg_d=4.289 std_dev=4.367
C1'	B	0, -0.082, 4.430, 8.942, 10.248 max_d=10.248 avg_d=4.430 std_dev=4.512
C4	B	0, -0.193, 4.350, 8.894, 10.650 max_d=10.650 avg_d=4.350 std_dev=4.543
P	A	0, 0.036, 4.778, 9.521, 9.625 max_d=9.625 avg_d=4.778 std_dev=4.742
C3'	B	0, 0.019, 4.887, 9.754, 10.024 max_d=10.024 avg_d=4.887 std_dev=4.867
OP2	A	0, 0.057, 5.054, 10.051, 10.053 max_d=10.053 avg_d=5.054 std_dev=4.997
N1	B	0, -0.274, 4.897, 10.067, 12.218 max_d=12.218 avg_d=4.897 std_dev=5.170
C2'	B	0, 0.006, 5.205, 10.404, 10.955 max_d=10.955 avg_d=5.205 std_dev=5.199
N3	B	0, -0.308, 5.151, 10.611, 12.938 max_d=12.938 avg_d=5.151 std_dev=5.460
OP1	A	0, 0.055, 5.520, 10.984, 11.194 max_d=11.194 avg_d=5.520 std_dev=5.465
C2	B	0, -0.384, 5.326, 11.037, 13.642 max_d=13.642 avg_d=5.326 std_dev=5.711
O3'	B	0, -0.013, 5.700, 11.414, 12.319 max_d=12.319 avg_d=5.700 std_dev=5.714
O2'	B	0, 0.006, 5.922, 11.837, 12.523 max_d=12.523 avg_d=5.922 std_dev=5.915
N2	B	0, -0.495, 6.124, 12.744, 15.898 max_d=15.898 avg_d=6.124 std_dev=6.620

Atoms distances (summary)

Atoms distances Chain-A - Chain-A

Atom	C1'	C2	C2'	C3'	C4	C4'	C5	C5'	C6	C8	N1	N2	N3	N7	N9	O2'	O3'	O4'	O5'	O6	OP1	OP2	P
C1'	0.00	0.04	0.00	0.01	0.01	0.02	0.01	0.07	0.01	0.01	0.03	0.05	0.03	0.01	0.00	0.03	0.15	0.01	0.15	0.01	0.10	0.25	0.18
C2	0.04	0.00	0.49	0.70	0.01	0.46	0.00	0.70	0.01	0.01	0.01	0.00	0.01	0.01	0.02	0.14	0.35	0.22	0.98	0.01	1.18	1.27	1.09
C2'	0.00	0.49	0.00	0.00	0.23	0.01	0.07	0.15	0.17	0.29	0.35	0.60	0.50	0.19	0.02	0.00	0.03	0.01	0.26	0.10	0.19	0.30	0.26
C3'	0.01	0.70	0.00	0.00	0.32	0.00	0.14	0.01	0.28	0.32	0.53	0.89	0.67	0.18	0.02	0.01	0.00	0.03	0.04	0.20	0.13	0.10	0.06
C4	0.01	0.01	0.23	0.32	0.00	0.20	0.00	0.22	0.00	0.00	0.01	0.01	0.01	0.00	0.01	0.07	0.10	0.13	0.32	0.01	0.32	0.27	0.27
C4'	0.02	0.46	0.01	0.00	0.20	0.00	0.06	0.00	0.15	0.31	0.33	0.59	0.44	0.21	0.04	0.11	0.02	0.01	0.01	0.09	0.10	0.02	0.01
C5	0.01	0.00	0.07	0.14	0.00	0.06	0.00	0.15	0.00	0.00	0.01	0.00	0.00	0.00	0.00	0.09	0.05	0.06	0.24	0.01	0.31	0.47	0.35
C5'	0.07	0.70	0.15	0.01	0.22	0.00	0.15	0.00	0.18	0.66	0.47	0.96	0.64	0.53	0.19	0.05	0.15	0.02	0.00	0.15	0.10	0.01	0.01
C6	0.01	0.01	0.17	0.28	0.00	0.15	0.00	0.18	0.00	0.00	0.00	0.01	0.01	0.01	0.01	0.10	0.10	0.10	0.28	0.00	0.29	0.32	0.28
C8	0.01	0.01	0.29	0.32	0.00	0.31	0.00	0.66	0.00	0.00	0.01	0.01	0.01	0.00	0.00	0.14	0.28	0.12	0.96	0.01	1.08	1.40	1.17
N1	0.03	0.01	0.35	0.53	0.01	0.33	0.01	0.47	0.00	0.01	0.00	0.02	0.00	0.01	0.02	0.12	0.25	0.17	0.68	0.00	0.80	0.85	0.74
N2	0.05	0.00	0.60	0.89	0.01	0.59	0.00	0.96	0.01	0.01	0.02	0.00	0.01	0.01	0.02	0.19	0.48	0.26	1.32	0.02	1.71	1.86	1.57
N3	0.03	0.01	0.50	0.67	0.01	0.44	0.00	0.64	0.01	0.01	0.00	0.01	0.00	0.00	0.02	0.14	0.30	0.22	0.88	0.00	1.00	1.02	0.92
N7	0.01	0.01	0.19	0.18	0.00	0.21	0.00	0.53	0.01	0.00	0.01	0.01	0.00	0.00	0.00	0.14	0.20	0.06	0.77	0.01	0.99	1.33	1.05
N9	0.00	0.02	0.02	0.02	0.01	0.04	0.00	0.19	0.01	0.00	0.02	0.02	0.02	0.00	0.00	0.05	0.12	0.01	0.31	0.01	0.31	0.50	0.39
O2'	0.03	0.14	0.00	0.01	0.07	0.11	0.09	0.05	0.10	0.14	0.12	0.19	0.14	0.14	0.05	0.00	0.07	0.06	0.24	0.11	0.17	0.38	0.27
O3'	0.15	0.35	0.03	0.00	0.10	0.02	0.05	0.15	0.10	0.28	0.25	0.48	0.30	0.20	0.12	0.07	0.00	0.13	0.12	0.06	0.38	0.21	0.21
O4'	0.01	0.22	0.01	0.03	0.13	0.01	0.06	0.02	0.10	0.12	0.17	0.26	0.22	0.06	0.01	0.06	0.13	0.00	0.08	0.07	0.10	0.02	0.02
O5'	0.15	0.98	0.26	0.04	0.32	0.01	0.24	0.00	0.28	0.96	0.68	1.32	0.88	0.77	0.31	0.24	0.12	0.08	0.00	0.23	0.02	0.01	0.00
O6	0.01	0.01	0.10	0.20	0.01	0.09	0.01	0.15	0.00	0.01	0.00	0.02	0.00	0.01	0.01	0.11	0.06	0.07	0.23	0.00	0.32	0.42	0.33
OP1	0.10	1.18	0.19	0.13	0.32	0.10	0.31	0.10	0.29	1.08	0.80	1.71	1.00	0.99	0.31	0.17	0.38	0.10	0.02	0.32	0.00	0.00	0.00
OP2	0.25	1.27	0.30	0.10	0.27	0.02	0.47	0.01	0.32	1.40	0.85	1.86	1.02	1.33	0.50	0.38	0.21	0.02	0.01	0.42	0.00	0.00	0.01
P	0.18	1.09	0.26	0.06	0.27	0.01	0.35	0.01	0.28	1.17	0.74	1.57	0.92	1.05	0.39	0.27	0.21	0.02	0.00	0.33	0.00	0.01	0.00

Atoms distances Chain-A - Chain-B

Atom	C1'	C2	C2'	C3'	C4	C4'	C5	C5'	C6	C8	N1	N2	N3	N7	N9	O2'	O3'	O4'	O5'	O6	OP1	OP2	P
C1'	0.57	0.82	0.73	0.62	1.07	0.46	1.58	0.66	1.70	1.51	1.25	0.55	0.72	1.90	1.02	0.65	0.48	0.29	0.24	2.15	0.07	0.07	0.06
C2	0.47	0.32	0.50	0.55	0.48	0.50	0.70	0.67	0.56	1.01	0.29	0.43	0.36	1.11	0.62	0.51	0.46	0.45	0.36	0.72	0.04	0.06	0.02
C2'	1.19	1.50	1.23	1.05	1.73	0.79	2.24	0.92	2.38	2.13	1.94	1.20	1.38	2.54	1.65	1.17	0.86	0.78	0.77	2.84	0.46	0.50	0.47
C3'	1.07	1.26	1.11	0.95	1.57	0.79	2.14	1.01	2.28	2.10	1.77	0.88	1.15	2.51	1.55	1.03	0.75	0.74	0.93	2.79	0.78	0.82	0.78
C4	0.83	0.84	0.98	0.99	1.01	0.77	1.25	0.87	1.21	1.36	0.95	0.79	0.86	1.54	1.04	0.95	0.92	0.64	0.46	1.40	0.07	0.07	0.03
C4'	0.62	0.64	0.76	0.70	1.02	0.64	1.57	0.91	1.68	1.61	1.15	0.26	0.57	1.97	1.05	0.66	0.55	0.47	0.65	2.18	0.58	0.57	0.54
C5	1.26	1.31	1.47	1.54	1.33	1.22	1.33	1.22	1.26	1.40	1.24	1.36	1.34	1.43	1.32	1.46	1.53	1.04	0.69	1.22	0.13	0.09	0.12
C5'	0.80	0.43	0.90	0.95	0.92	0.93	1.38	1.22	1.37	1.59	0.84	0.07	0.49	1.83	1.06	0.83	0.84	0.78	1.01	1.80	1.00	0.99	0.96
C6	1.39	1.37	1.58	1.72	1.33	1.43	1.18	1.42	1.08	1.29	1.21	1.46	1.41	1.18	1.35	1.59	1.74	1.23	0.83	0.90	0.17	0.12	0.18
C8	1.22	1.44	1.48	1.49	1.44	1.10	1.60	1.11	1.62	1.55	1.50	1.43	1.40	1.72	1.38	1.46	1.47	0.92	0.60	1.76	0.12	0.08	0.08
N1	0.99	0.89	1.06	1.18	0.89	1.05	0.79	1.12	0.67	1.04	0.76	0.98	0.93	0.94	0.97	1.08	1.15	0.93	0.68	0.54	0.11	0.10	0.14
N2	0.06	0.34	0.23	0.23	0.22	0.31	0.52	0.46	0.44	0.83	0.26	0.54	0.28	0.97	0.31	0.17	0.26	0.28	0.15	0.62	0.06	0.05	0.05
N3	0.44	0.34	0.52	0.50	0.67	0.43	1.06	0.62	1.02	1.24	0.60	0.23	0.36	1.48	0.75	0.49	0.37	0.33	0.28	1.30	0.04	0.05	0.02
N7	1.45	1.65	1.75	1.81	1.58	1.39	1.56	1.33	1.55	1.53	1.58	1.71	1.64	1.58	1.52	1.75	1.84	1.17	0.75	1.50	0.15	0.10	0.13
N9	0.86	0.99	1.04	1.02	1.15	0.74	1.47	0.85	1.50	1.47	1.20	0.88	0.96	1.74	1.13	1.00	0.93	0.60	0.42	1.78	0.07	0.06	0.02
O2'	1.10	1.83	1.08	0.74	1.90	0.34	2.48	0.43	2.76	2.16	2.35	1.57	1.59	2.68	1.69	1.02	0.47	0.51	0.40	3.28	0.13	0.23	0.18
O3'	0.71	1.30	0.73	0.41	1.48	0.38	2.15	0.66	2.42	1.94	1.92	0.97	1.06	2.46	1.34	0.63	0.18	0.22	0.46	3.03	0.39	0.42	0.37
O4'	0.42	0.35	0.60	0.59	0.74	0.59	1.25	0.84	1.32	1.31	0.81	0.06	0.33	1.65	0.78	0.51	0.49	0.44	0.40	1.78	0.31	0.25	0.26
O5'	1.16	0.60	1.23	1.34	1.08	1.34	1.36	1.60	1.23	1.70	0.77	0.45	0.77	1.81	1.28	1.21	1.28	1.17	1.39	1.53	1.37	1.37	1.33
O6	1.73	1.74	2.01	2.20	1.61	1.85	1.34	1.76	1.29	1.35	1.53	1.87	1.78	1.15	1.59	2.05	2.31	1.56	1.02	1.04	0.23	0.15	0.25
OP1	1.43	0.63	1.45	1.58	1.19	1.65	1.40	1.93	1.18	1.88	0.72	0.50	0.87	1.90	1.47	1.45	1.52	1.50	1.82	1.42	1.90	1.88	1.85
OP2	1.69	0.92	1.71	1.89	1.31	1.97	1.31	2.22	0.99	1.87	0.76	0.93	1.14	1.73	1.61	1.75	1.88	1.80	2.06	0.99	2.10	2.10	2.05
P	1.34	0.60	1.38	1.55	1.05	1.61	1.20	1.88	0.94	1.69	0.55	0.63	0.82	1.67	1.34	1.38	1.52	1.43	1.70	1.12	1.75	1.73	1.69

Atoms distances Chain-B - Chain-B

Atom	C1'	C2	C2'	C3'	C4	C4'	C5	C5'	C6	C8	N1	N2	N3	N7	N9	O2'	O3'	O4'	O5'	O6	OP1	OP2	P
C1'	0.00	0.02	0.00	0.01	0.02	0.01	0.02	0.08	0.02	0.01	0.02	0.01	0.02	0.01	0.01	0.01	0.02	0.00	0.20	0.02	0.53	0.51	0.34
C2	0.02	0.00	0.48	0.40	0.00	0.16	0.01	0.32	0.01	0.00	0.00	0.00	0.00	0.00	0.01	0.36	0.47	0.39	0.38	0.01	1.19	1.03	0.79
C2'	0.00	0.48	0.00	0.00	0.25	0.03	0.14	0.11	0.22	0.23	0.37	0.58	0.46	0.13	0.04	0.00	0.10	0.03	0.43	0.17	0.61	0.51	0.50
C3'	0.01	0.40	0.00	0.00	0.27	0.01	0.27	0.04	0.32	0.19	0.38	0.46	0.36	0.22	0.15	0.01	0.00	0.01	0.37	0.31	0.27	0.34	0.35
C4	0.02	0.00	0.25	0.27	0.00	0.05	0.00	0.20	0.01	0.00	0.01	0.01	0.00	0.00	0.01	0.11	0.30	0.21	0.30	0.01	1.11	0.78	0.66
C4'	0.01	0.16	0.03	0.01	0.05	0.00	0.01	0.01	0.06	0.14	0.12	0.21	0.14	0.09	0.03	0.18	0.01	0.01	0.02	0.04	0.18	0.34	0.05
C5	0.02	0.01	0.14	0.27	0.00	0.01	0.00	0.18	0.01	0.00	0.00	0.01	0.01	0.00	0.01	0.05	0.30	0.13	0.30	0.01	1.35	0.73	0.72
C5'	0.08	0.32	0.11	0.04	0.20	0.01	0.18	0.00	0.24	0.11	0.30	0.38	0.28	0.10	0.10	0.07	0.06	0.02	0.01	0.23	0.30	0.34	0.04
C6	0.02	0.01	0.22	0.32	0.01	0.06	0.01	0.24	0.00	0.01	0.00	0.01	0.01	0.01	0.01	0.08	0.37	0.22	0.34	0.00	1.46	0.86	0.82
C8	0.01	0.00	0.23	0.19	0.00	0.14	0.00	0.11	0.01	0.00	0.01	0.01	0.00	0.00	0.00	0.29	0.20	0.18	0.17	0.01	1.10	0.33	0.45
N1	0.02	0.00	0.37	0.38	0.01	0.12	0.00	0.30	0.00	0.01	0.00	0.01	0.01	0.00	0.01	0.24	0.45	0.33	0.38	0.01	1.37	1.01	0.85
N2	0.01	0.00	0.58	0.46	0.01	0.21	0.01	0.38	0.01	0.01	0.01	0.00	0.01	0.01	0.01	0.50	0.56	0.45	0.40	0.01	1.14	1.12	0.81
N3	0.02	0.00	0.46	0.36	0.00	0.14	0.01	0.28	0.01	0.00	0.01	0.01	0.00	0.01	0.01	0.34	0.41	0.36	0.35	0.01	1.03	0.93	0.70
N7	0.01	0.00	0.13	0.22	0.00	0.09	0.00	0.10	0.01	0.00	0.00	0.01	0.01	0.00	0.00	0.22	0.24	0.06	0.23	0.01	1.37	0.46	0.60
N9	0.01	0.01	0.04	0.15	0.01	0.03	0.01	0.10	0.01	0.00	0.01	0.01	0.01	0.00	0.00	0.08	0.15	0.03	0.23	0.01	0.91	0.56	0.50
O2'	0.01	0.36	0.00	0.01	0.11	0.18	0.05	0.07	0.08	0.29	0.24	0.50	0.34	0.22	0.08	0.00	0.14	0.15	0.22	0.05	0.35	0.37	0.27
O3'	0.02	0.47	0.10	0.00	0.30	0.01	0.30	0.06	0.37	0.20	0.45	0.56	0.41	0.24	0.15	0.14	0.00	0.02	0.34	0.37	0.41	0.32	0.33
O4'	0.00	0.39	0.03	0.01	0.21	0.01	0.13	0.02	0.22	0.18	0.33	0.45	0.36	0.06	0.03	0.15	0.02	0.00	0.17	0.18	0.21	0.48	0.18
O5'	0.20	0.38	0.43	0.37	0.30	0.02	0.30	0.01	0.34	0.17	0.38	0.40	0.35	0.23	0.23	0.22	0.34	0.17	0.00	0.33	0.02	0.03	0.01
O6	0.02	0.01	0.17	0.31	0.01	0.04	0.01	0.23	0.00	0.01	0.01	0.01	0.01	0.01	0.01	0.05	0.37	0.18	0.33	0.00	1.58	0.81	0.83
OP1	0.53	1.19	0.61	0.27	1.11	0.18	1.35	0.30	1.46	1.10	1.37	1.14	1.03	1.37	0.91	0.35	0.41	0.21	0.02	1.58	0.00	0.00	0.00
OP2	0.51	1.03	0.51	0.34	0.78	0.34	0.73	0.34	0.86	0.33	1.01	1.12	0.93	0.46	0.56	0.37	0.32	0.48	0.03	0.81	0.00	0.00	0.00
P	0.34	0.79	0.50	0.35	0.66	0.05	0.72	0.04	0.82	0.45	0.85	0.81	0.70	0.60	0.50	0.27	0.33	0.18	0.01	0.83	0.00	0.00	0.00