sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1VQ9-01017-02372
X
>3CCV-01017-02372
X
>3G71-0724-02225
X
>3CCU-01017-02372
X
>3U5H-51080-52618
X
>2OTJ-01017-02372
X
>3G6E-0724-02225
X
>3G71-01017-02372
X
>3CCJ-01017-02372
X
>1Q86-A1017-A2372
X
>3CCL-0724-02225
X
</seq>
<hsp>
0 1:0.162097895251
0 2:0.765529313028
0 3:0.13147033025
0 4:0.629293648017
0 5:0.159367267577
0 6:0.692414270632
0 7:0.163672390866
0 8:0.157431884045
0 9:0.208616834453
0 10:0.999998778639
1 2:0.66094715823
1 3:0.0904415771567
1 4:0.539703216888
1 5:0.0774509131544
1 6:0.569870516847
1 7:0.0539957308733
1 8:0.1316113141
1 9:0.0575707794495
1 10:0.898620256558
2 3:0.66509879208
2 4:0.592777699396
2 5:0.654304895819
2 6:0.145387936499
2 7:0.630669634082
2 8:0.666791001699
2 9:0.63315664541
2 10:0.269991280994
3 4:0.522663284226
3 5:0.0516514468139
3 6:0.585728473754
3 7:0.0631866781299
3 8:0.0829274856283
3 9:0.105732493939
3 10:0.907749474104
4 5:0.526884601551
4 6:0.5169465415
4 7:0.519146945345
4 8:0.55051947193
4 9:0.498920410831
4 10:0.825073973877
5 6:0.568914905415
5 7:0.0542074505604
5 8:0.100046040129
5 9:0.0784580030493
5 10:0.894414988196
6 7:0.545170273242
6 8:0.595501565839
6 9:0.537186144192
6 10:0.369236682027
7 8:0.112483058808
7 9:0.0677622936278
7 10:0.872182212307
8 9:0.142574022236
8 10:0.909620061274
9 10:0.87378702381
</hsp>