sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1M90-A724-A2225
X
>1K8A-A724-A2225
X
>1KD1-A724-A2225
X
>1Q82-A724-A2225
X
>1K9M-A724-A2225
X
>1QVG-0724-02225
X
>3R8O-A765-A1510
X
>3PDR-A56-A8
X
>1XMQ-A745-A1478
X
>2UXC-A745-A1484
X
>2UUA-A745-A1484
X
</seq>
<hsp>
0 1:0.0748970033431
0 2:0.089108945793
0 3:0.126135042586
0 4:0.0805302933825
0 5:0.117391523673
0 6:0.346421880687
0 7:0.946434431842
0 8:0.440347570336
0 9:0.434827347983
0 10:0.333556190718
1 2:0.0502467092187
1 3:0.0620376303361
1 4:0.0304616329755
1 5:0.0955988769423
1 6:0.382279672221
1 7:0.977933688772
1 8:0.468136204278
1 9:0.453825153727
1 10:0.350825792083
2 3:0.0650546297853
2 4:0.0408705219788
2 5:0.0897620521633
2 6:0.39062909126
2 7:0.987733456565
2 8:0.472680109898
2 9:0.45849975726
2 10:0.355167630735
3 4:0.0663650962242
3 5:0.0914476325421
3 6:0.421893154091
3 7:1.0
3 8:0.495028960017
3 9:0.475223945064
3 10:0.371014610899
4 5:0.0783692213903
4 6:0.375664027227
4 7:0.97549599777
4 8:0.460336050445
4 9:0.446044186436
4 10:0.341648789797
5 6:0.389816657638
5 7:0.957814151053
5 8:0.454279784662
5 9:0.438182509061
5 10:0.327801852344
6 7:0.684526898761
6 8:0.173904972639
6 9:0.19976661276
6 10:0.197790617763
7 8:0.546529894028
7 9:0.561930549228
7 10:0.652319636352
8 9:0.069724240648
8 10:0.150587853821
9 10:0.120637508458
</hsp>