sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A972-B81
X
>2OTL-0972-981
X
>3CCM-0972-981
X
>1VQ6-0972-981
X
>1VQ4-0972-981
X
>1VQP-0972-981
X
>1YJ9-0972-981
X
>1YIT-0972-981
X
</seq>
<hsp>
0 1:0.833134550619
0 2:0.825587916895
0 3:0.80104933487
0 4:0.889338803075
0 5:0.949358733733
0 6:0.836899895246
0 7:0.999999713166
1 2:0.620778434027
1 3:0.562299169845
1 4:0.440459279718
1 5:0.592955186431
1 6:0.491400601288
1 7:0.415360832443
2 3:0.255991131503
2 4:0.468068627692
2 5:0.24838879536
2 6:0.273067026894
2 7:0.50361674664
3 4:0.48889197461
3 5:0.330792261748
3 6:0.356416953483
3 7:0.475640711127
4 5:0.392494757247
4 6:0.269334488534
4 7:0.432165166919
5 6:0.301931520576
5 7:0.487432894409
6 7:0.36802082065
</hsp>