sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OVS-D16-D18
X
>1GTR-B55-B57
X
>2ZUE-B59-B61
X
>1IL2-D55-D57
X
>2J00-V58-V60
X
>1ASZ-R56-R58
X
>1ASY-R56-R58
X
</seq>
<hsp>
0 1:0.710508501419
0 2:0.590917902159
0 3:0.681433041548
0 4:0.559515489019
0 5:1.0
0 6:0.984220981273
1 2:0.158853578096
1 3:0.147659812815
1 4:0.223812305331
1 5:0.59072795998
1 6:0.461747936181
2 3:0.150414089016
2 4:0.114465990217
2 5:0.629794311093
2 6:0.527464885578
3 4:0.160959957456
3 5:0.529809877918
3 6:0.409633391985
4 5:0.590016787437
4 6:0.507892958171
5 6:0.184125633862
</hsp>