sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-1688-1920
X
>3F1E-A941-A924
X
>3CCJ-01538-01603
X
>3R8O-A967-A950
X
>2J00-A941-A924
X
>2UUB-A941-A924
X
>2VQE-A475-A394
X
</seq>
<hsp>
0 1:0.361941341078
0 2:0.879328729857
0 3:0.382345835213
0 4:0.450980156665
0 5:0.362124921582
0 6:0.939859450541
1 2:0.993504170944
1 3:0.19775154947
1 4:0.151713714495
1 5:0.113687694955
1 6:0.956260598191
2 3:0.884455947788
2 4:0.999061290516
2 5:0.999998340197
2 6:0.82136931333
3 4:0.182156163635
3 5:0.172821186235
3 6:0.969595592557
4 5:0.159642187486
4 6:0.993002644739
5 6:0.968971602633
</hsp>