sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A210-A160
X
>2J01-A232-A183
X
>3U5H-592-543
X
>3CCR-0210-0160
X
>3OH5-A232-A183
X
>3OH7-A232-A183
X
</seq>
<hsp>
0 1:0.61123085125
0 2:0.593409663686
0 3:0.386219050827
0 4:0.834968585859
0 5:0.84175330438
1 2:0.614690548109
1 3:0.752720022448
1 4:0.805748187383
1 5:0.798388363235
2 3:0.746954207093
2 4:0.653190002956
2 5:0.681785507994
3 4:0.994347658454
3 5:1.0
4 5:0.116205389759
</hsp>