sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UXC-A1158-A1137
X
>3CCJ-046-074
X
>3OGY-A241-A244
X
>3OGE-A241-A244
X
>2ZJR-X2169-X2136
X
>2QWY-B7-B41
X
>3OHD-A241-A244
X
>3OHC-A241-A244
X
>3F1E-A241-A244
X
>3F1G-A241-A244
X
>3R8O-V43-V9
X
>1U9S-A138-A96
X
</seq>
<hsp>
0 1:0.536666496411
0 2:0.488376696609
0 3:0.486714823184
0 4:0.999994114484
0 5:0.896751913986
0 6:0.440316864978
0 7:0.43466635339
0 8:0.64951311247
0 9:0.64936687298
0 10:0.786277087831
0 11:0.53951290129
1 2:0.504994216695
1 3:0.50738482862
1 4:0.793533375882
1 5:0.579108024954
1 6:0.561330488979
1 7:0.568112121975
1 8:0.626480297525
1 9:0.631778493884
1 10:0.538486520181
1 11:0.451815109913
2 3:0.027326165271
2 4:0.595571694733
2 5:0.652400677294
2 6:0.270335283317
2 7:0.273210445731
2 8:0.4635452048
2 9:0.457526480594
2 10:0.652880229325
2 11:0.478345109491
3 4:0.597348268396
3 5:0.650835973195
3 6:0.26440517163
3 7:0.265826219215
3 8:0.455172424719
3 9:0.449510621512
3 10:0.646269629336
3 11:0.469380249811
4 5:0.514228584103
4 6:0.643907391482
4 7:0.6552384983
4 8:0.561038985963
4 9:0.553733462225
4 10:0.677987319799
4 11:0.687367887503
5 6:0.597551555863
5 7:0.610321453888
5 8:0.511677996121
5 9:0.512033075567
5 10:0.288136944388
5 11:0.437436180206
6 7:0.0252002957661
6 8:0.31235778617
6 9:0.303680476625
6 10:0.539043037771
6 11:0.329581137401
7 8:0.315072163371
7 9:0.306278340121
7 10:0.546534447758
7 11:0.332376383808
8 9:0.0224080849055
8 10:0.420911070614
8 11:0.294180966567
9 10:0.429368698433
9 11:0.299855343964
10 11:0.302007762117
</hsp>