ClaRNA

Doublet Group info: classifier/stacking/>>/CU/sub-003

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: >>/CU/sub-003
Members:
count: 74
download members
1YIJ:02742:02743
1N8R:A1977:A1978
1VQ7:02696:02697
3OHD:A1126:A1127
1YI2:01774:01775
1S72:01977:01978
3G71:01977:01978
1N8R:A1774:A1775
2J03:A2560:A2561
2QA4:0268:0269
1VQ8:01774:01775
3CPW:0719:0720
1VQN:01387:01388
1VQM:01436:01437
3U5D:11272:11273
3I56:02052:02053
1YIT:0299:0300
1N32:A1481:A1482
1VQN:02559:02560
3U5H:52578:52579
3OHK:A2286:A2287
3CC7:01540:01541
1VQ4:0240:0241
1YI2:02072:02073
1VQ6:0268:0269
2OTL:052:053
3CPW:01727:01728
3CCR:01774:01775
2OTJ:01387:01388
1VQN:01540:01541
3CC2:0959:0960
3CME:0719:0720
1M90:A2397:A2398
2OTL:02072:02073
1N32:A458:A459
3G71:01222:01223
3G71:02397:02398
2VQE:A876:A877
2J03:A1653:A1654
1JJ2:0240:0241
3CME:0240:0241
1VQP:0719:0720
1JJ2:052:053
1YHQ:01727:01728
3CCV:0959:0960
3G71:01540:01541
464D:C3:C4
3G71:02492:02493
1Q82:A2217:A2218
1YIJ:0268:0269
3DJ0:A138:A139
2QA4:02491:02492
1VQN:0240:0241
1YHQ:0984:0985
3CCM:0959:0960
1VQ7:0719:0720
2DRB:B24:B25
1VQM:01727:01728
3CME:01138:01139
1K9M:A2696:A2697
3OHY:A1456:A1457
1YJW:0984:0985
2UUA:A312:A313
1YTY:C2:C3
1FFK:052:053
1VQ6:01222:01223
1NJI:A268:A269
3I56:01864:01865
3CPW:02217:02218
3CCE:0432:0433
1YHQ:01222:01223
3OH7:A2476:A2477
3G6E:01222:01223
434D:A3:A4
Closest classifer groups: show all      show selected
Group Members RMSD
base-ribose/H_9BR 5 0.034
stacking/<< 34 0.055
stacking/>> 9 0.075
base-ribose/H_0BR 6 0.081
base-phosphate/SW_2BPh 2 0.099
base-ribose/W_4BR 26 0.131
base-phosphate/H_9BPh 2 0.163
base-ribose/W_5BR 59 0.173
base-phosphate/H_0BPh 2 0.187
stacking/>< 5 0.187

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol