sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A33-A34
X
>3CMA-02051-02052
X
>3OHC-A1303-A1304
X
>3KNI-A1245-A1246
X
>1VQ7-02051-02052
X
>3OH7-A1041-A1042
X
>3OHZ-A1980-A1981
X
>1JJ2-01532-01533
X
>3CCM-01532-01533
X
>3CMA-01495-01496
X
>2QA4-0479-0480
X
>3F1F-A2276-A2277
X
>3R8O-A1159-A1160
X
>2VQF-A1036-A1037
X
>1VQ6-01744-01745
X
>3OH5-A254-A255
X
</seq>
<hsp>
0 1:0.274907186242
0 2:0.22728889561
0 3:0.393363453469
0 4:0.22534499022
0 5:0.843339688936
0 6:0.344653980362
0 7:0.342094674093
0 8:0.338462764189
0 9:0.307807960334
0 10:0.509102739896
0 11:0.28725867866
0 12:0.456589791797
0 13:0.651371022178
0 14:0.409138436466
0 15:0.749966704182
1 2:0.35354039465
1 3:0.476304868139
1 4:0.122864512671
1 5:0.683662627268
1 6:0.371268625196
1 7:0.54168638564
1 8:0.554613132688
1 9:0.496623341719
1 10:0.682883112728
1 11:0.344558858526
1 12:0.473943931656
1 13:0.524737370814
1 14:0.409124808621
1 15:0.816151396086
2 3:0.473355093981
2 4:0.280097555964
2 5:0.858672680639
2 6:0.205521492614
2 7:0.31966532002
2 8:0.335266557622
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2 10:0.422665655906
2 11:0.403340353361
2 12:0.391791634353
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2 15:0.609188218224
3 4:0.421895013036
3 5:0.773844070788
3 6:0.460328474899
3 7:0.332817373719
3 8:0.34147448109
3 9:0.282527655452
3 10:0.4679285087
3 11:0.451591578313
3 12:0.520085621758
3 13:0.774077756099
3 14:0.450048861728
3 15:0.868341560338
4 5:0.660965176458
4 6:0.275410004297
4 7:0.448456783374
4 8:0.460760154581
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4 12:0.372898967671
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4 14:0.316781456852
4 15:0.722770573711
5 6:0.700837529698
5 7:0.907674740788
5 8:0.928432835503
5 9:0.848427181449
5 10:0.999998509628
5 11:0.770838438739
5 12:0.632289082346
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5 14:0.585266061902
5 15:0.974930493968
6 7:0.362532545906
6 8:0.380814085488
6 9:0.374134115292
6 10:0.442323906935
6 11:0.425155735518
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6 13:0.463061044008
6 14:0.307189071563
6 15:0.538957239853
7 8:0.0940050684168
7 9:0.121864416463
7 10:0.194321435128
7 11:0.444824681896
7 12:0.452826914359
7 13:0.733497297504
7 14:0.413276942208
7 15:0.654349512555
8 9:0.135258677272
8 10:0.243435543343
8 11:0.427540996692
8 12:0.441753162982
8 13:0.754193246469
8 14:0.43245097142
8 15:0.650103428159
9 10:0.287417291818
9 11:0.373106707061
9 12:0.426342472795
9 13:0.7273049391
9 14:0.355073617816
9 15:0.673898369705
10 11:0.580665612257
10 12:0.529527279845
10 13:0.761553748217
10 14:0.501631072656
10 15:0.609244509765
11 12:0.396783590139
11 13:0.57771879421
11 14:0.302547799116
11 15:0.678849664306
12 13:0.477792627614
12 14:0.243774122833
12 15:0.457353771958
13 14:0.481890269164
13 15:0.577668917974
14 15:0.54720357748
</hsp>